Identifier Index

[ A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _ ]

A

AccumulateCounts() (in rdkit.ML.EnrichPlot)	AddPattern() (in ExclusionList)	AngleTo() (in Point3D)
AccumulateVotes() (in InfoBitRanker)	AddPharmacophore() (in MolViewer)	AngleTo() (in PointND)
ACETATE (in rdkit.Chem.MolKey.InchiInfo)	AddPharmacophore() (in MolViewer)	apDict (in rdkit.Chem.Draw.SimilarityMaps)
ACETIC_ACID (in rdkit.Chem.MolKey.InchiInfo)	AddPoint() (in MLDataSet)	append() (in ROMolList)
actCol (in RunDetails)	AddPoints() (in MLDataSet)	append() (in FilterCatalogEntryList)
ActFunc (in rdkit.ML.Neural.ActFuncs)	AddProductTemplate() (in ChemicalReaction)	append() (in MatchTypeVect)
ActFuncs (in rdkit.ML.Neural)	AddReactantTemplate() (in ChemicalReaction)	append() (in MolList)
acyc_smarts (in rdkit.Chem.Fraggle.FraggleSim)	AddRecursiveQueriesToReaction() (in ChemicalReaction)	append() (in VectFilterMatch)
add_new_match() (in SingleBestAtoms)	AddRecursiveQuery() (in rdkit.Chem.rdmolops)	AppendSkeletonPoints() (in rdkit.Chem.Subshape.BuilderUtils)
add_new_match() (in SingleBestAtomsCompleteRingsOnly)	AddSupplementalData() (in ModelPackage)	ArbAxisRotation() (in rdkit.Chem.Features.FeatDirUtilsRD)
add_new_match() (in SingleBestBonds)	AddTable() (in DbConnect)	AROMATIC (in BondType)
add_new_match() (in SingleBestBondsCompleteRingsOnly)	AddTree() (in Forest)	aromaticNTransform (in rdkit.Chem.Scaffolds.MurckoScaffold)
AddAgentTemplate() (in ChemicalReaction)	AddVect() (in VectCollection)	AssertionError
AddAtom() (in EditableMol)	ADJUST_EMPTY (in rdkit.Chem)	assign_isotopes_from_class_tag() (in rdkit.Chem.fmcs.fmcs')
AddAtom() (in RWMol)	ADJUST_EMPTY (in rdkit.Chem.AllChem)	AssignAtomChiralTagsFromStructure() (in rdkit.Chem.rdmolops)
AddBit() (in BitEnsemble)	ADJUST_EMPTY (in rdkit.Chem.rdmolops)	AssignBondOrdersFromTemplate() (in rdkit.Chem.AllChem)
AddBond() (in EditableMol)	ADJUST_EMPTY (in AdjustQueryWhichFlags)	AssignMolFeatsToPoints() (in rdkit.Chem.Subshape.BuilderUtils)
AddBond() (in RWMol)	ADJUST_IGNOREDUMMIES (in rdkit.Chem)	AssignPattyTypes() (in rdkit.Chem.AtomPairs.Sheridan)
addCanvasDashedWedge() (in Canvas)	ADJUST_IGNOREDUMMIES (in rdkit.Chem.AllChem)	AssignRadicals() (in rdkit.Chem.rdmolops)
addCanvasDashedWedge() (in Canvas)	ADJUST_IGNOREDUMMIES (in rdkit.Chem.rdmolops)	AssignStereochemistry() (in rdkit.Chem.rdmolops)
addCanvasDashedWedge() (in CanvasBase)	ADJUST_IGNOREDUMMIES (in AdjustQueryWhichFlags)	AsymmetricSimilarity() (in rdkit.DataStructs.cDataStructs)
addCanvasDashedWedge() (in Canvas)	ADJUST_RINGSONLY (in rdkit.Chem)	atEnd() (in ResonanceMolSupplier)
addCanvasDashedWedge() (in Canvas)	ADJUST_RINGSONLY (in rdkit.Chem.AllChem)	atEnd() (in ForwardSDMolSupplier)
addCanvasDashedWedge() (in Canvas)	ADJUST_RINGSONLY (in rdkit.Chem.rdmolops)	atEnd() (in SDMolSupplier)
addCanvasLine() (in Canvas)	ADJUST_RINGSONLY (in AdjustQueryWhichFlags)	Atom (in rdkit.Chem.fmcs.fmcs')
addCanvasLine() (in Canvas)	ADJUST_SETALL (in rdkit.Chem)	Atom (in rdkit.Chem.rdchem)
addCanvasLine() (in CanvasBase)	ADJUST_SETALL (in rdkit.Chem.AllChem)	atom_check_failed (in StruChkFlag)
addCanvasLine() (in Canvas)	ADJUST_SETALL (in rdkit.Chem.rdmolops)	atom_clash (in StruChkFlag)
addCanvasLine() (in Canvas)	ADJUST_SETALL (in AdjustQueryWhichFlags)	atom_indices (in Bond)
addCanvasLine() (in Canvas)	AdjustComposite (in rdkit.ML.Composite)	atom_indices (in Subgraph)
addCanvasPolygon() (in Canvas)	adjustDegree (in AdjustQueryParameters)	atom_smarts (in Atom)
addCanvasPolygon() (in Canvas)	adjustDegreeFlags (in AdjustQueryParameters)	atom_smarts (in CangenNode)
addCanvasPolygon() (in CanvasBase)	AdjustQueryParameters (in rdkit.Chem.rdmolops)	atom_typer_any() (in rdkit.Chem.fmcs.fmcs')
addCanvasPolygon() (in Canvas)	AdjustQueryProperties() (in rdkit.Chem.rdmolops)	atom_typer_isotopes() (in rdkit.Chem.fmcs.fmcs')
addCanvasPolygon() (in Canvas)	AdjustQueryWhichFlags (in rdkit.Chem.rdmolops)	atom_typers (in rdkit.Chem.fmcs.fmcs')
addCanvasPolygon() (in Canvas)	adjustRingCount (in AdjustQueryParameters)	atomCompare (in Default)
addCanvasText() (in Canvas)	adjustRingCountFlags (in AdjustQueryParameters)	AtomCompare (in rdkit.Chem.rdFMCS)
addCanvasText() (in Canvas)	agentWeight (in ReactionFingerprintParams)	atomContrib() (in rdkit.Chem.Fraggle.FraggleSim)
addCanvasText() (in CanvasBase)	aggCanvas (in rdkit.Chem.Draw)	atomLabelFontFace (in DrawingOptions)
addCanvasText() (in Canvas)	aldehydePatt (in rdkit.Chem.SATIS)	atomLabelFontSize (in DrawingOptions)
addCanvasText() (in Canvas)	alias_conversion_failed (in StruChkFlag)	atomLabelMinFontSize (in DrawingOptions)
addCanvasText() (in Canvas)	Align() (in O3A)	atomLabels (in MolDrawOptions)
AddCatalog() (in FilterCatalogParams)	AlignDepict (in rdkit.Chem.ChemUtils)	AtomMonomerInfo (in rdkit.Chem.rdchem)
AddChild() (in Cluster)	AlignDepict() (in rdkit.Chem.ChemUtils.AlignDepict)	AtomMonomerType (in rdkit.Chem.rdchem)
AddChild() (in DecTreeNode)	alignedConfId (in SubshapeAlignment)	atomNumberOffset (in DrawingOptions)
AddChild() (in TreeNode)	AlignMol() (in rdkit.Chem.PandasTools)	AtomNumEqualsQueryAtom() (in rdkit.Chem.rdqueries)
AddChild() (in VLibNode)	AlignMol() (in rdkit.Chem.rdMolAlign)	AtomNumGreaterQueryAtom() (in rdkit.Chem.rdqueries)
AddChildNode() (in TreeNode)	AlignMolConformers() (in rdkit.Chem.rdMolAlign)	AtomNumLessQueryAtom() (in rdkit.Chem.rdqueries)
AddChildren() (in Cluster)	AlignMolToTemplate2D() (in rdkit.Chem.TemplateAlign)	AtomPairFP (in FingerprintType)
addCircle() (in Canvas)	AlignToScaffold() (in rdkit.Chem.PandasTools)	AtomPairs (in rdkit.Chem)
AddColumn() (in DbConnect)	All (in FeatMapScoreMode)	atomPairs (in FilterMatch)
AddConformer() (in Mol)	ALL (in FilterCatalogs)	AtomPairsParameters (in rdkit.Chem.rdMolDescriptors)
AddDistanceConstraint() (in ForceField)	all_stereo_re (in rdkit.Chem.MolKey.InchiInfo)	AtomPDBResidueInfo (in rdkit.Chem.rdchem)
AddEdge() (in MolCatalog)	all_subgraph_extensions() (in rdkit.Chem.fmcs.fmcs')	atomPs (in MolDrawing)
AddEntry() (in MolCatalog)	AllBitSimilarity() (in rdkit.DataStructs.cDataStructs)	atomRegions (in MolDrawOptions)
AddEntry() (in FilterCatalog)	AllChem (in rdkit.Chem)	AtomRings() (in RingInfo)
AddExcludedVolumes() (in rdkit.Chem.Pharm3D.EmbedLib)	ALLOW_CHARGE_SEPARATION (in rdkit.Chem)	atoms (in EnumerationMolecule)
AddExclusion() (in FragmentMatcher)	ALLOW_CHARGE_SEPARATION (in rdkit.Chem.AllChem)	AtomSmartsNoAromaticity (in rdkit.Chem.fmcs.fmcs')
AddExtraPoint() (in ForceField)	ALLOW_CHARGE_SEPARATION (in rdkit.Chem.rdchem)	AtomTypes (in rdkit.Chem.EState)
AddFeatPoint() (in FeatMap)	ALLOW_CHARGE_SEPARATION (in ResonanceFlags)	atomTypes (in AtomPairsParameters)
AddFeature() (in FeatMap)	ALLOW_INCOMPLETE_OCTETS (in rdkit.Chem)	atsFilter (in rdkit.VLib.NodeLib.demo)
AddFixedPoint() (in ForceField)	ALLOW_INCOMPLETE_OCTETS (in rdkit.Chem.AllChem)	AttachFileToLog() (in rdkit.rdBase')
AddFragsFromMol() (in FragCatGenerator)	ALLOW_INCOMPLETE_OCTETS (in rdkit.Chem.rdchem)	Avalon (in rdkit)
AddHs() (in rdkit.Chem.rdmolops)	ALLOW_INCOMPLETE_OCTETS (in ResonanceFlags)	avalonSimilarityBits (in rdkit.Avalon.pyAvalonTools)
AddModel() (in Composite)	AllProbeBitsMatch() (in rdkit.DataStructs.cDataStructs)	avalonSSSBits (in rdkit.Avalon.pyAvalonTools)
AddMol() (in MolDrawing)	ALPHA (in rdkit.Chem.Features.ShowFeats)	Average (in MergeMethod)
AddMoleculeColumnToFrame() (in rdkit.Chem.PandasTools)	amidePatt (in rdkit.Chem.SATIS)	AverageErrors() (in Composite)
AddMurckoToFrame() (in rdkit.Chem.PandasTools)	AnalyzeComposite (in rdkit.ML)	AverageErrors() (in Forest)
AddParent() (in VLibNode)	AnalyzeSparseVects() (in rdkit.ML.InfoTheory.BitRank)
AddParent() (in SupplyNode)	AngleTo() (in Point2D)