RDKit: Class Members

| RDKit Open-source cheminformatics and machine learning.

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Here is a list of all class members with links to the classes they belong to:

### - c -

- C : RDKit::MolDraw2D
- C_ATOM_SPTR : RDKit::Atom
- CachedMolHolder() : RDKit::CachedMolHolder
- CachedSmilesMolHolder() : RDKit::CachedSmilesMolHolder
- CachedTrustedSmilesMolHolder() : RDKit::CachedTrustedSmilesMolHolder
- calcChiralVolume() : DistGeom::ChiralViolationContrib
- calcEnergy() : ForceFields::ForceField
- calcExplicitValence() : RDKit::Atom
- calcGrad() : ForceFields::ForceField
- calcImplicitValence() : RDKit::Atom
- calcMetricMatrix() : RDDataManip::MetricMatrixCalc< vectType, entryType >
- calcPerpendicular() : RDKit::MolDraw2D
- calculateScale() : RDKit::MolDraw2D
- Canceled : RDKit::MCSResult
- canGrowBiggerThan() : RDKit::FMCS::Seed
- canon_atom() : RDKit::Canon::canon_atom
- canonicalizeOrientation() : RDDepict::EmbeddedFrag
- CartesianProductStrategy() : RDKit::CartesianProductStrategy
- CAT_GRAPH_TRAITS : RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- Catalog() : RDCatalog::Catalog< entryType, paramType >
- CatalogGraph : RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- ccw : RDDepict::EmbeddedAtom
- CENTROID : RDPickers::HierarchicalClusterPicker
- char_type : boost_adaptbx::python::streambuf
- Charge : RDKit::StructureCheck::AugmentedAtom , RDKit::StructureCheck::Ligand
- ChargeFix() : RDKit::StructureCheck::ChargeFix
- ChargeIncTable : RDKit::StructureCheck::StructCheckerOptions
- CheckCollisions : RDKit::StructureCheck::StructCheckerOptions
- checkForEnd() : RDKit::ForwardSDMolSupplier
- checkIfMatchAndAppend() : RDKit::FMCS::MaximumCommonSubgraph
- checkMolStructure() : RDKit::StructureCheck::StructChecker
- CheckStereo : RDKit::StructureCheck::StructCheckerOptions
- checkValid() : DistGeom::BoundsMatrix
- ChemicalFeature() : ChemicalFeatures::ChemicalFeature
- ChemicalReaction() : RDKit::ChemicalReaction
- ChemicalReactionException() : RDKit::ChemicalReactionException
- ChemicalReactionParserException() : RDKit::ChemicalReactionParserException
- chi : ForceFields::MMFF::MMFFCovRadPauEle
- CHI_OTHER : RDKit::Atom
- CHI_TETRAHEDRAL_CCW : RDKit::Atom
- CHI_TETRAHEDRAL_CW : RDKit::Atom
- CHI_UNSPECIFIED : RDKit::Atom
- CHILD_TYPE : Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- CHILD_VECT : Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- CHILD_VECT_CI : Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- CHILD_VECT_I : Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- ChiralAtomCompareFunctor() : RDKit::Canon::ChiralAtomCompareFunctor
- ChiralAtomsHash : RDKit::MolHash::HashSet
- ChiralBondsHash : RDKit::MolHash::HashSet
- ChiralityHash : RDKit::MolHash::HashSet
- ChiralSet() : DistGeom::ChiralSet
- ChiralType : RDKit::Atom
- ChiralViolationContrib() : DistGeom::ChiralViolationContrib
- CHISQUARE : RDInfoTheory::InfoBitRanker
- chunkSize : RDKit::RGroupDecompositionParameters
- circleAtoms : RDKit::MolDrawOptions
- CISTRANS : RDDepict::EmbeddedAtom
- CisTransNbr : RDDepict::EmbeddedAtom
- cleanup() : RDKit::FPBReader
- cleanup_rdvalue() : RDKit::RDValue
- clear() : Queries::SetQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , RDKit::FMCS::DuplicatedSeedCache , RDKit::FMCS::RingMatchTableSet , RDKit::FMCS::SeedSet , RDKit::FMCS::TargetMatch , RDKit::FMCS::TArray2D< T > , RDKit::RDProps , RDKit::RWMol , RDKit::StructureCheck::StructCheckerOptions , RDKit::Trajectory
- clearAllAtomBookmarks() : RDKit::ROMol
- clearAllBondBookmarks() : RDKit::ROMol
- clearAtomBookmark() : RDKit::ROMol
- clearBackground : RDKit::MolDrawOptions
- clearBits() : BitVect , ExplicitBitVect , SparseBitVect
- clearBondBookmark() : RDKit::ROMol
- clearCache() : RDKit::MolChemicalFeature
- clearComputedProps() : RDKit::RDProps , RDKit::ROMol
- clearConformers() : RDKit::ROMol
- clearConfs : RDKit::DGeomHelpers::EmbedParameters
- clearDrawing() : RDKit::MolDraw2D , RDKit::MolDraw2DCairo , RDKit::MolDraw2DQt , RDKit::MolDraw2DSVG , RDKit::MolDraw2Dwx
- clearProp() : RDKit::FilterCatalogEntry , RDKit::FragCatalogEntry , RDKit::MolCatalogEntry , RDKit::RDProps
- ClearTee() : boost::logging::rdLogger
- clearVal() : RDKit::Dict
- CLINK : RDPickers::HierarchicalClusterPicker
- Clone() : RDKit::FilterMatcherBase
- close() : RDKit::MolWriter , RDKit::PDBWriter , RDKit::SDWriter , RDKit::SmilesWriter , RDKit::TDTWriter
- cluster() : RDPickers::HierarchicalClusterPicker
- ClusterMethod : RDPickers::HierarchicalClusterPicker
- coeff : RDKit::MolAlign::O3AFuncData
- CollectionType : RDKit::MolChemicalFeatureDef
- collectVotes() : RDInfoTheory::BitCorrMatGenerator
- CollisionLimitPercent : RDKit::StructureCheck::StructCheckerOptions
- colour() : RDKit::MolDraw2D
- comment : RDKit::FilterData_t
- compare() : RDKit::Canon::bondholder
- CompareFunctionsUserData : RDKit::MCSParameters
- compareParams() : RDGeom::UniformGrid3D
- CompleteRingsOnly : RDKit::MCSBondCompareParameters
- Composition2N() : RDKit::FMCS::Composition2N
- compute2N() : RDKit::FMCS::Composition2N
- computeBox() : RDDepict::EmbeddedFrag
- computeCostMatrix() : RDKit::MolAlign::LAP
- computeDistMat() : RDDepict::EmbeddedFrag
- computeKey() : RDKit::FMCS::SubstructureCache::HashKey
- computeMinCostPath() : RDKit::MolAlign::LAP
- computeMMFFCharges() : RDKit::MMFF::MMFFMolProperties
- computeProperties() : RDKit::Descriptors::Properties
- computeRemainingSize() : RDKit::FMCS::Seed
- computeRingMatchTable() : RDKit::FMCS::RingMatchTableSet
- Cond : RDKit::StructureCheck::PathEntry
- cond_used : RDKit::StructureCheck::PathEntry
- Conformer() : RDKit::Conformer
- ConformerException() : RDKit::ConformerException
- const_iterator : RDKit::FMCS::SeedSet
- CONST_SENTRY : RDKit::FilterCatalog
- ConstBondIterator_() : RDKit::ConstBondIterator_
- container : Rankers::argless< T >
- CONTAINER_TYPE : Queries::SetQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- continuousHighlight : RDKit::MolDrawOptions
- contribs() : ForceFields::ForceField
- ConvertAtomTexts : RDKit::StructureCheck::StructCheckerOptions
- ConvertSText : RDKit::StructureCheck::StructCheckerOptions
- coordMap : RDKit::DGeomHelpers::EmbedParameters
- copy() : DistGeom::ChiralViolationContrib , DistGeom::DistViolationContrib , DistGeom::FourthDimContrib , ForceFields::CrystalFF::TorsionAngleContribM6 , ForceFields::ForceFieldContrib , ForceFields::MMFF::AngleBendContrib , ForceFields::MMFF::AngleConstraintContrib , ForceFields::MMFF::BondStretchContrib , ForceFields::MMFF::DistanceConstraintContrib , ForceFields::MMFF::EleContrib , ForceFields::MMFF::OopBendContrib , ForceFields::MMFF::PositionConstraintContrib , ForceFields::MMFF::StretchBendContrib , ForceFields::MMFF::TorsionAngleContrib , ForceFields::MMFF::TorsionConstraintContrib , ForceFields::MMFF::VdWContrib , ForceFields::UFF::AngleBendContrib , ForceFields::UFF::AngleConstraintContrib , ForceFields::UFF::BondStretchContrib , ForceFields::UFF::DistanceConstraintContrib , ForceFields::UFF::InversionContrib , ForceFields::UFF::PositionConstraintContrib , ForceFields::UFF::TorsionAngleContrib , ForceFields::UFF::TorsionConstraintContrib , ForceFields::UFF::vdWContrib , Queries::AndQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::EqualityQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::GreaterEqualQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::GreaterQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::LessEqualQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::LessQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::OrQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::SetQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , Queries::XOrQuery< MatchFuncArgType, DataFuncArgType, needsConversion > , RDGeom::Point2D , RDGeom::Point3D , RDGeom::Point , RDGeom::PointND , RDKit::Atom , RDKit::AtomMonomerInfo , RDKit::AtomPDBResidueInfo , RDKit::AtomRingQuery , RDKit::Bond , RDKit::CartesianProductStrategy , RDKit::EnumerationStrategyBase , RDKit::EvenSamplePairsStrategy , RDKit::ExclusionList , RDKit::FilterHierarchyMatcher , RDKit::FilterMatcherBase , RDKit::FilterMatchOps::And , RDKit::FilterMatchOps::Not , RDKit::FilterMatchOps::Or , RDKit::HasPropQuery< TargetPtr > , RDKit::HasPropWithValueQuery< TargetPtr, T > , RDKit::HasPropWithValueQuery< TargetPtr, std::string > , RDKit::QueryAtom , RDKit::QueryBond , RDKit::RandomSampleAllBBsStrategy , RDKit::RandomSampleStrategy , RDKit::RecursiveStructureQuery , RDKit::SmartsMatcher
- CopyComplete : RDKit::FMCS::Seed
- countMatches() : RDKit::SubstructLibrary
- crd : ForceFields::MMFF::MMFFProp
- createFromParent() : RDKit::FMCS::Seed
- createPartialBond() : RDKit::RWMol
- CRIPPEN : RDKit::MolAlign::O3A
- CrippenParamCollection() : RDKit::Descriptors::CrippenParamCollection
- crossProduct() : RDGeom::Point3D