RDKit
Open-source cheminformatics and machine learning.
Class Index
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  A  
EmbeddedFrag (RDDepict)   LessEqualQuery (Queries)   MolSupplier (RDKit)   SmartsMatcher (RDKit)   
EmbedParameters (RDKit::DGeomHelpers)   LessQuery (Queries)   MolWriter (RDKit)   SmilesMolSupplier (RDKit)   
AdjustQueryParameters (RDKit::MolOps)   EnumerateLibrary (RDKit)   Ligand (RDKit::StructureCheck)   MultiFPBReader (RDKit)   SmilesParseException (RDKit)   
And (RDKit::FilterMatchOps)   EnumerateLibraryBase (RDKit)   LinearCatalog (RDCatalog)   MultiMolDraw2D (RDKit)   SmilesParserParams (RDKit)   
AndQuery (Queries)   EnumerationParams (RDKit)   LocaleSwitcher (RDKit::Utils)   
  N  
SmilesWriter (RDKit)   
AngleBendContrib (ForceFields::MMFF)   EnumerationStrategyBase (RDKit)   
  M  
Snapshot (RDKit)   
AngleBendContrib (ForceFields::UFF)   EnumerationStrategyException (RDKit)   Neighbourhood (RDKit::StructureCheck)   SparseBitVect   
AngleConstraintContrib (ForceFields::MMFF)   EqualityQuery (Queries)   MatchingAtomIterator_ (RDKit)   NewBond (RDKit::FMCS)   SparseIntVect (RDKit)   
AngleConstraintContrib (ForceFields::UFF)   EvenSamplePairsStrategy (RDKit)   Matrix (RDNumeric)   Not (RDKit::FilterMatchOps)   SpecialChiralityAtomCompareFunctor (RDKit::Canon)   
AromaticAtomIterator_ (RDKit)   ExclusionList (RDKit)   MaximumCommonSubgraph (RDKit::FMCS)   
  O  
SpecialSymmetryAtomCompareFunctor (RDKit::Canon)   
Atom (RDKit)   ExecStatistics (RDKit::FMCS)   MaxMinPicker (RDPickers)   SquareMatrix (RDNumeric)   
AtomCompareFunctor (RDKit::Canon)   ExplicitBitVect   MaxMinPickInfo (RDPickers)   O3A (RDKit::MolAlign)   StretchBendContrib (ForceFields::MMFF)   
AtomicParams (ForceFields::UFF)   ExplicitFeature (RDFeatures)   MCSAtomCompareParameters (RDKit)   O3AConstraint (RDKit::MolAlign)   StructChecker (RDKit::StructureCheck)   
AtomIterator_ (RDKit)   
  F  
MCSBondCompareParameters (RDKit)   O3AConstraintVect (RDKit::MolAlign)   StructCheckerOptions (RDKit::StructureCheck)   
AtomMonomerInfo (RDKit)   MCSParameters (RDKit)   O3AFuncData (RDKit::MolAlign)   StructCheckTautomer (RDKit::StructureCheck)   
AtomPDBResidueInfo (RDKit)   FeatureFileParseException (RDKit)   MCSProgressData (RDKit)   OopBendContrib (ForceFields::MMFF)   SubstructLibrary (RDKit)   
AtomRingQuery (RDKit)   FileParseException (RDKit)   MCSResult (RDKit)   Or (RDKit::FilterMatchOps)   SubstructureCache (RDKit::FMCS)   
AttribType (RDKit::SLNParse)   FilterCatalog (RDKit)   MetricMatrixCalc (RDDataManip)   OrQuery (Queries)   SymmMatrix (RDNumeric)   
AugmentedAtom (RDKit::StructureCheck)   FilterCatalogEntry (RDKit)   MMFFAngle (ForceFields::MMFF)   
  P  
  T  
  B  
FilterCatalogParams (RDKit)   MMFFAngleCollection (ForceFields::MMFF)   
FilterData_t (RDKit)   MMFFAromCollection (ForceFields::MMFF)   Dict::Pair (RDKit)   Target (RDKit::FMCS)   
BadFileException (RDKit)   FilterHierarchyMatcher (RDKit)   MMFFAtomProperties (RDKit::MMFF)   ParamCollection (ForceFields::UFF)   TargetMatch (RDKit::FMCS)   
BitCorrMatGenerator (RDInfoTheory)   FilterMatch (RDKit)   MMFFBndkCollection (ForceFields::MMFF)   PathEntry (RDKit::StructureCheck)   TArray2D (RDKit::FMCS)   
BitVect   FilterMatcherBase (RDKit)   MMFFBond (ForceFields::MMFF)   PatternHolder (RDKit)   TDTMolSupplier (RDKit)   
Bond (RDKit)   FilterProperty_t (RDKit)   MMFFBondCollection (ForceFields::MMFF)   PDBMolSupplier (RDKit)   TDTWriter (RDKit)   
BondIterator_ (RDKit)   ForceField (ForceFields)   MMFFChg (ForceFields::MMFF)   PDBWriter (RDKit)   DuplicatedSeedCache::TKey (RDKit::FMCS)   
BondStretchContrib (ForceFields::MMFF)   ForceFieldContrib (ForceFields)   MMFFChgCollection (ForceFields::MMFF)   PeriodicTable (RDKit)   TorsionAngleContrib (ForceFields::UFF)   
BondStretchContrib (ForceFields::UFF)   ForwardSDMolSupplier (RDKit)   MMFFCovRadPauEle (ForceFields::MMFF)   Point (RDGeom)   TorsionAngleContrib (ForceFields::MMFF)   
BoundsMatrix (DistGeom)   FourthDimContrib (DistGeom)   MMFFCovRadPauEleCollection (ForceFields::MMFF)   Point2D (RDGeom)   TorsionAngleContribM6 (ForceFields::CrystalFF)   
  C  
FPBReader (RDKit)   MMFFDef (ForceFields::MMFF)   Point3D (RDGeom)   TorsionConstraintContrib (ForceFields::MMFF)   
FPHolderBase (RDKit)   MMFFDefCollection (ForceFields::MMFF)   PointND (RDGeom)   TorsionConstraintContrib (ForceFields::UFF)   
CachedMolHolder (RDKit)   FragCatalogEntry (RDKit)   MMFFDfsbCollection (ForceFields::MMFF)   PositionConstraintContrib (ForceFields::UFF)   Trajectory (RDKit)   
CachedSmilesMolHolder (RDKit)   FragCatGenerator (RDKit)   MMFFHerschbachLaurie (ForceFields::MMFF)   PositionConstraintContrib (ForceFields::MMFF)   Transform2D (RDGeom)   
CachedTrustedSmilesMolHolder (RDKit)   FragCatParams (RDKit)   MMFFHerschbachLaurieCollection (ForceFields::MMFF)   Properties (RDKit::Descriptors)   Transform3D (RDGeom)   
CartesianProductStrategy (RDKit)   FragFPGenerator (RDKit)   MMFFMolProperties (RDKit::MMFF)   PropertyFunctor (RDKit::Descriptors)   
  U  
Catalog (RDCatalog)   FragmenterBondType (RDKit::MolFragmenter)   MMFFOop (ForceFields::MMFF)   PySequenceHolder   
CatalogEntry (RDCatalog)   FreeChemicalFeature (ChemicalFeatures)   MMFFOopCollection (ForceFields::MMFF)   
  Q  
UFFAngle (ForceFields::UFF)   
CatalogParams (RDCatalog)   
  G  
MMFFPBCI (ForceFields::MMFF)   UFFBond (ForceFields::UFF)   
ChargeFix (RDKit::StructureCheck)   MMFFPBCICollection (ForceFields::MMFF)   Query (Queries)   UFFInv (ForceFields::UFF)   
ChemicalFeature (ChemicalFeatures)   GasteigerParams (RDKit)   MMFFProp (ForceFields::MMFF)   QueryAtom (RDKit)   UFFTor (ForceFields::UFF)   
ChemicalReaction (RDKit)   Graph (RDKit::FMCS)   MMFFPropCollection (ForceFields::MMFF)   QueryAtomIterator_ (RDKit)   UFFVdW (ForceFields::UFF)   
ChemicalReactionException (RDKit)   GreaterEqualQuery (Queries)   MMFFStbn (ForceFields::MMFF)   QueryBond (RDKit)   UniformGrid3D (RDGeom)   
ChemicalReactionParserException (RDKit)   GreaterQuery (Queries)   MMFFStbnCollection (ForceFields::MMFF)   
  R  
  V  
ChiralAtomCompareFunctor (RDKit::Canon)   Grid3D (RDGeom)   MMFFTor (ForceFields::MMFF)   
ChiralSet (DistGeom)   GridException (RDGeom)   MMFFTorCollection (ForceFields::MMFF)   RandomSampleAllBBsStrategy (RDKit)   Value (RDKit::RDTypeTag::detail)   
ChiralViolationContrib (DistGeom)   
  H  
MMFFVdW (ForceFields::MMFF)   RandomSampleStrategy (RDKit)   ValueErrorException   
Composition2N (RDKit::FMCS)   MMFFVdWCollection (ForceFields::MMFF)   RangeQuery (Queries)   VdWContrib (ForceFields::MMFF)   
Conformer (RDKit)   SubstructureCache::HashKey (RDKit::FMCS)   MMFFVdWRijstarEps (ForceFields::MMFF)   RDAny (RDKit)   Vector (RDNumeric)   
ConformerException (RDKit)   HashSet (RDKit::MolHash)   MolAlignException (RDKit::MolAlign)   RDProps (RDKit)   
  X  
ConstBondIterator_ (RDKit)   HasPropQuery (RDKit)   MolBundle (RDKit)   RDValue (RDKit)   
CrippenParamCollection (RDKit::Descriptors)   HasPropWithValueQuery (RDKit)   MolCatalogEntry (RDKit)   ReactionFingerprintParams (RDKit)   XOrQuery (Queries)   
CrippenParams (RDKit::Descriptors)   HasPropWithValueQuery< TargetPtr, std::string > (RDKit)   MolCatalogParams (RDKit)   ReactionPickler (RDKit)   
  a  
  D  
HeteroatomIterator_ (RDKit)   MolChemicalFeature (RDKit)   ReactionPicklerException (RDKit)   
HierarchCatalog (RDCatalog)   MolChemicalFeatureDef (RDKit)   RecursiveStructureQuery (RDKit)   argless (Rankers)   
Data3Ddescriptors   HierarchicalClusterPicker (RDPickers)   MolChemicalFeatureFactory (RDKit)   ResonanceMolSupplier (RDKit)   atomicData (RDKit)   
DatastructsException   
  I  
MolData3Ddescriptors   RGroupDecomposition (RDKit)   
  b  
DefaultTorsionBondSmarts (RDKit::MMFF::Tools)   MolDraw2D (RDKit)   RGroupDecompositionParameters (RDKit)   
DefaultTorsionBondSmarts (RDKit::UFF::Tools)   ImplicitFeature (RDFeatures)   MolDraw2DCairo (RDKit)   RingInfo (RDKit)   bondholder (RDKit::Canon)   
DepictException (RDDepict)   IncEntry (RDKit::StructureCheck)   MolDraw2DQt (RDKit)   RingMatchTableSet (RDKit::FMCS)   
  c  
Dict (RDKit)   IndexErrorException   MolDraw2DSVG (RDKit)   ROMol (RDKit)   
DiscreteDistMat (RDKit)   InfoBitRanker (RDInfoTheory)   MolDraw2Dwx (RDKit)   RWMol (RDKit)   canon_atom (RDKit::Canon)   
DiscreteValueVect (RDKit)   Int2Type (Queries)   MolDrawOptions (RDKit)   RxnSanitizeException (RDKit)   charptr_functor (RDKit)   
DistanceConstraintContrib (ForceFields::MMFF)   Invariant (Invar)   MolFragment (RDKit::FMCS)   
  S  
  g  
DistanceConstraintContrib (ForceFields::UFF)   InversionContrib (ForceFields::UFF)   MolHistogram (RDKit::MolAlign)   
DistPicker (RDPickers)   
  K  
MolHolder (RDKit)   SDM (RDKit::MolAlign)   gtIIPair (RDDepict)   
DistViolationContrib (DistGeom)   MolHolderBase (RDKit)   SDMolSupplier (RDKit)   
  i  
DuplicatedSeedCache (RDKit::FMCS)   KeyErrorException   MolPickler (RDKit)   SDWriter (RDKit)   
  E  
SubstructureCache::KeyNumericMetrics (RDKit::FMCS)   MolPicklerException (RDKit)   Seed (RDKit::FMCS)   streambuf::istream (boost_adaptbx::python)   
  L  
MolSanitizeException (RDKit)   SeedSet (RDKit::FMCS)   
  l  
EleContrib (ForceFields::MMFF)   MolStackElem (RDKit::Canon)   SetQuery (Queries)   
EmbeddedAtom (RDDepict)   LAP (RDKit::MolAlign)   MolStackUnion (RDKit::Canon)   SLNParseException (RDKit)   larger_of (RDKit)   
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