- gather()
: ForceFields::ForceField
- getActiveAtom()
: RDKit::RWMol
- getActiveConformer()
: RDKit::MolChemicalFeature
- getAllAtomsWithBookmark()
: RDKit::ROMol
- getAllBondsWithBookmark()
: RDKit::ROMol
- getAtIdx()
: RDKit::RecursiveStructureQuery
- getAtomBonds()
: RDKit::ROMol
- getAtomBookmarks()
: RDKit::ROMol
- getAtomDegree()
: RDKit::ROMol
- getAtomicNum()
: RDKit::Atom
- getAtomicNumber()
: RDKit::PeriodicTable
- getAtomicWeight()
: RDKit::PeriodicTable
- getAtomNeighbors()
: RDKit::ROMol
- getAtomPos()
: RDKit::Conformer
- getAtoms()
: RDKit::MolChemicalFeature
- getAtomWithBookmark()
: RDKit::ROMol
- getAtomWithIdx()
: RDKit::ROMol
- getBeginAtom()
: RDKit::Bond
- getBeginAtomIdx()
: RDKit::Bond
- GetBit()
: BitVect
, ExplicitBitVect
, SparseBitVect
- getBitId()
: RDCatalog::CatalogEntry
- GetBitSet()
: SparseBitVect
- getBondBetweenAtoms()
: RDKit::ROMol
- getBondBookmarks()
: RDKit::ROMol
- getBondDir()
: RDKit::Bond
- getBondType()
: RDKit::Bond
- getBondTypeAsDouble()
: RDKit::Bond
- getBondWithBookmark()
: RDKit::ROMol
- getBondWithIdx()
: RDKit::ROMol
- getBoxNx()
: RDDepict::EmbeddedFrag
- getBoxNy()
: RDDepict::EmbeddedFrag
- getBoxPx()
: RDDepict::EmbeddedFrag
- getBoxPy()
: RDDepict::EmbeddedFrag
- getCatalogParams()
: RDCatalog::Catalog< entryType, paramType >
- getChiralTag()
: RDKit::Atom
- getCol()
: RDNumeric::Matrix< TYPE >
, RDNumeric::SymmMatrix< TYPE >
- getConformer()
: RDKit::ROMol
- getCorrBitList()
: RDInfoTheory::BitCorrMatGenerator
- getCorrMat()
: RDInfoTheory::BitCorrMatGenerator
- getData()
: RDKit::DiscreteValueVect
, RDNumeric::Matrix< TYPE >
, RDNumeric::SymmMatrix< TYPE >
, RDNumeric::Vector< TYPE >
- getDataFunc()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- getDataSize()
: RDNumeric::SymmMatrix< TYPE >
, RDNumeric::Matrix< TYPE >
- getDativeFlag()
: RDKit::Atom
- getDefaultValence()
: RDKit::PeriodicTable
- getDegree()
: RDKit::Atom
- getDescription()
: RDKit::FragCatalogEntry
, RDKit::MolCatalogEntry
, RDCatalog::CatalogEntry
, Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- getDirs()
: RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- getDiscrims()
: RDKit::FragCatalogEntry
- getDist()
: RDKit::DiscreteDistMat
- getDownEntryList()
: RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- getEdges()
: RDKit::ROMol
- getElementSymbol()
: RDKit::PeriodicTable
- GetEmbeddedAtom()
: RDDepict::EmbeddedFrag
- GetEmbeddedAtoms()
: RDDepict::EmbeddedFrag
- getEndAtom()
: RDKit::Bond
- getEndAtomIdx()
: RDKit::Bond
- getEndsOpen()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- getEnergy()
: DistGeom::ChiralViolationContrib
, DistGeom::DistViolationContrib
, DistGeom::FourthDimContrib
, ForceFields::ForceFieldContrib
, ForceFields::UFF::AngleBendContrib
, ForceFields::UFF::BondStretchContrib
, ForceFields::UFF::DistanceConstraintContrib
, ForceFields::UFF::vdWContrib
, ForceFields::UFF::TorsionAngleContrib
- getEntriesOfOrder()
: RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- getEntryWithBitId()
: RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- getEntryWithIdx()
: RDCatalog::Catalog< entryType, paramType >
, RDCatalog::HierarchCatalog< entryType, paramType, orderType >
, RDCatalog::LinearCatalog< entryType, orderType >
- getExplicitValence()
: RDKit::Atom
- getExpression()
: Invar::Invariant
- getFactory()
: RDKit::MolChemicalFeature
- getFamily()
: RDKit::MolChemicalFeature
, RDKit::MolChemicalFeatureDef
, RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, ChemicalFeatures::ChemicalFeature
, ChemicalFeatures::FreeChemicalFeature
- getFeatDef()
: RDKit::MolChemicalFeature
- getFeaturesForMol()
: RDKit::MolChemicalFeatureFactory
- getFile()
: Invar::Invariant
- getFormalCharge()
: RDKit::Atom
- getFPForMol()
: RDKit::FragFPGenerator
- getFPLength()
: RDCatalog::Catalog< entryType, paramType >
- getFuncGroup()
: RDKit::FragCatParams
- getFuncGroupMap()
: RDKit::FragCatalogEntry
- getFuncGroups()
: RDKit::FragCatParams
- getGrad()
: ForceFields::UFF::DistanceConstraintContrib
, ForceFields::UFF::vdWContrib
, ForceFields::UFF::TorsionAngleContrib
, DistGeom::ChiralViolationContrib
, DistGeom::DistViolationContrib
, DistGeom::FourthDimContrib
, ForceFields::ForceFieldContrib
, ForceFields::UFF::AngleBendContrib
, ForceFields::UFF::BondStretchContrib
- getGridIndex()
: RDGeom::UniformGrid3D
- getGridPointIndex()
: RDGeom::Grid3D
, RDGeom::UniformGrid3D
- getGridPointLoc()
: RDGeom::Grid3D
, RDGeom::UniformGrid3D
- getHybridization()
: RDKit::Atom
- getId()
: RDKit::Conformer
- getIdOfEntryWithBitId()
: RDCatalog::HierarchCatalog< entryType, paramType, orderType >
- getIdx()
: RDKit::Atom
, RDKit::Bond
- getImplicitPropertiesFlag()
: RDKit::ChemicalReaction
- getImplicitValence()
: RDKit::Atom
- getIsAromatic()
: RDKit::Atom
, RDKit::Bond
- getIsConjugated()
: RDKit::Bond
- getItemText()
: RDKit::SDMolSupplier
, RDKit::SmilesMolSupplier
, RDKit::TDTMolSupplier
- getLastAtom()
: RDKit::RWMol
- getLength()
: RDKit::DiscreteValueVect
, RDKit::SparseIntVect< IndexType >
- getLine()
: Invar::Invariant
- getLoc()
: RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- getLower()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- getLowerBound()
: DistGeom::BoundsMatrix
- getLowerFragLength()
: RDKit::FragCatParams
- getLowerVolumeBound()
: DistGeom::ChiralSet
- getMass()
: RDKit::Atom
- getMatchFunc()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- getMessage()
: Invar::Invariant
- getMol()
: RDDepict::EmbeddedFrag
, RDKit::MolCatalogEntry
, RDKit::MolChemicalFeature
- getNegation()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- getNoImplicit()
: RDKit::Atom
- getNonzeroElements()
: RDKit::SparseIntVect< IndexType >
- getNouterElecs()
: RDKit::PeriodicTable
- getNumAtoms()
: RDKit::Conformer
, RDKit::MolChemicalFeature
, RDKit::ROMol
- GetNumBits()
: ExplicitBitVect
, BitVect
, SparseBitVect
- getNumBitsPerVal()
: RDKit::DiscreteValueVect
- getNumBonds()
: RDKit::ROMol
- getNumClasses()
: RDInfoTheory::InfoBitRanker
- getNumConformers()
: RDKit::ROMol
- getNumDigits()
: RDKit::TDTWriter
- getNumEntries()
: RDCatalog::HierarchCatalog< entryType, paramType, orderType >
, RDCatalog::Catalog< entryType, paramType >
- getNumExamples()
: RDInfoTheory::BitCorrMatGenerator
- getNumExplicitHs()
: RDKit::Atom
- getNumFeatureDefs()
: RDKit::MolChemicalFeatureFactory
- getNumFuncGroups()
: RDKit::FragCatParams
- getNumImplicitHs()
: RDKit::Atom
- getNumInstances()
: RDInfoTheory::InfoBitRanker
- getNumInts()
: RDKit::DiscreteValueVect
- GetNumOffBits()
: BitVect
, ExplicitBitVect
, SparseBitVect
- GetNumOnBits()
: BitVect
, ExplicitBitVect
, SparseBitVect
- getNumProductTemplates()
: RDKit::ChemicalReaction
- getNumRadicalElectrons()
: RDKit::Atom
- getNumReactantTemplates()
: RDKit::ChemicalReaction
- getNumWeights()
: RDKit::MolChemicalFeatureDef
- getNumX()
: RDGeom::UniformGrid3D
- getNumY()
: RDGeom::UniformGrid3D
- getNumZ()
: RDGeom::UniformGrid3D
- getOccupancyVect()
: RDGeom::Grid3D
, RDGeom::UniformGrid3D
- getOffset()
: RDGeom::UniformGrid3D
- GetOnBits()
: ExplicitBitVect
, SparseBitVect
, BitVect
- getOrder()
: RDKit::FragCatalogEntry
, RDKit::MolCatalogEntry
- getOtherAtom()
: RDKit::Bond
- getOtherAtomIdx()
: RDKit::Bond
- getOwningMol()
: RDKit::Atom
, RDKit::Conformer
, RDKit::Bond
- getParams()
: ForceFields::UFF::ParamCollection
, RDKit::GasteigerParams
, RDKit::Descriptors::CrippenParamCollection
- getPattern()
: RDKit::MolChemicalFeatureDef
- getPerpendicular()
: RDGeom::Point3D
- getPerturbationOrder()
: RDKit::Atom
- getPos()
: ChemicalFeatures::FreeChemicalFeature
, ChemicalFeatures::ChemicalFeature
, RDKit::MolChemicalFeature
- getPositions()
: RDKit::Conformer
- getProp()
: RDKit::Bond
, RDKit::MolCatalogEntry
, RDKit::ROMol
, RDKit::Atom
, RDKit::ROMol
, RDKit::FragCatalogEntry
, RDKit::Atom
, RDKit::Bond
, RDKit::FragCatalogEntry
, RDKit::MolCatalogEntry
- getPropList()
: RDKit::ROMol
, RDKit::Atom
, RDKit::Bond
- getQuery()
: RDKit::QueryBond
, RDKit::QueryAtom
, RDKit::Atom
, RDKit::Bond
- getQueryMol()
: RDKit::RecursiveStructureQuery
- getRb0()
: RDKit::PeriodicTable
- getRcovalent()
: RDKit::PeriodicTable
- getRingInfo()
: RDKit::ROMol
- getRow()
: RDNumeric::SymmMatrix< TYPE >
, RDNumeric::Matrix< TYPE >
- getRvdw()
: RDKit::PeriodicTable
- getSize()
: RDGeom::Grid3D
, RDGeom::UniformGrid3D
- getSmarts()
: RDKit::MolChemicalFeatureDef
, RDKit::FragCatalogEntry
- getSpacing()
: RDGeom::UniformGrid3D
- getStereo()
: RDKit::Bond
- getStereoAtoms()
: RDKit::Bond
- getSymbol()
: RDKit::Atom
- getTable()
: RDKit::PeriodicTable
- getTol()
: Queries::EqualityQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
, Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- getTolerance()
: RDKit::FragCatParams
- getTopN()
: RDInfoTheory::InfoBitRanker
- getTopology()
: RDKit::ROMol
- getTotalDegree()
: RDKit::Atom
- getTotalNumHs()
: RDKit::Atom
- getTotalVal()
: RDKit::SparseIntVect< IndexType >
, RDKit::DiscreteValueVect
- getType()
: RDKit::MolChemicalFeatureDef
, ChemicalFeatures::FreeChemicalFeature
, ChemicalFeatures::ChemicalFeature
, RDKit::MolChemicalFeature
, RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- getTypeStr()
: RDCatalog::CatalogParams
- getUpper()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- getUpperBound()
: DistGeom::BoundsMatrix
- getUpperFragLength()
: RDKit::FragCatParams
- getUpperVolumeBound()
: DistGeom::ChiralSet
- getVal()
: RDKit::Dict
, RDNumeric::Matrix< TYPE >
, RDKit::Dict
, RDGeom::Grid3D
, RDKit::DiscreteValueVect
, RDKit::Dict
, RDGeom::Grid3D
, RDNumeric::SymmMatrix< TYPE >
, RDGeom::UniformGrid3D
, RDNumeric::Vector< TYPE >
, RDKit::Dict
, RDKit::SparseIntVect< IndexType >
, RDGeom::UniformGrid3D
, Queries::EqualityQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- getValenceContrib()
: RDKit::Bond
- getValenceList()
: RDKit::PeriodicTable
- getValueType()
: RDKit::DiscreteValueVect
- getVertices()
: RDKit::ROMol
- getWrite2D()
: RDKit::TDTWriter
- getWriteNames()
: RDKit::TDTWriter
- GreaterEqualQuery()
: Queries::GreaterEqualQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- GreaterQuery()
: Queries::GreaterQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- GridException()
: RDGeom::GridException
Generated on Fri Apr 3 06:03:02 2009 for RDCode by
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