Everything


All Classes

RDConfig.ObsoleteCodeError
RDConfig.UnimplementedCodeError
rdkit.Avalon.pyAvalonTools.StruChkFlag
rdkit.Avalon.pyAvalonTools.StruChkResult
rdkit.Chem.BuildFragmentCatalog.RunDetails
rdkit.Chem.DSViewer.Displayable
rdkit.Chem.DSViewer.MolViewer
rdkit.Chem.Descriptors.PropertyFunctor
rdkit.Chem.Draw.MolDrawing'.DrawingOptions
rdkit.Chem.Draw.MolDrawing'.Font
rdkit.Chem.Draw.MolDrawing'.MolDrawing
rdkit.Chem.Draw.aggCanvas.Canvas
rdkit.Chem.Draw.cairoCanvas.Canvas
rdkit.Chem.Draw.canvasbase.CanvasBase
rdkit.Chem.Draw.mplCanvas.Canvas
rdkit.Chem.Draw.qtCanvas.Canvas
rdkit.Chem.Draw.rdMolDraw2D.IntStringMap
rdkit.Chem.Draw.rdMolDraw2D.MolDraw2D
rdkit.Chem.Draw.rdMolDraw2D.MolDraw2DSVG
rdkit.Chem.Draw.rdMolDraw2D.MolDrawOptions
rdkit.Chem.Draw.rdMolDraw2D.map_indexing_suite_IntStringMap_entry
rdkit.Chem.Draw.spingCanvas.Canvas
rdkit.Chem.EnumerateStereoisomers.StereoEnumerationOptions
rdkit.Chem.EnumerateStereoisomers._AtomFlipper
rdkit.Chem.EnumerateStereoisomers._BondFlipper
rdkit.Chem.EnumerateStereoisomers._RangeBitsGenerator
rdkit.Chem.EnumerateStereoisomers._UniqueRandomBitsGenerator
rdkit.Chem.FastSDMolSupplier.FastSDMolSupplier
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParseError
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParser
rdkit.Chem.FeatMaps.FeatMapPoint.FeatMapPoint
rdkit.Chem.FeatMaps.FeatMapUtils.DirMergeMode
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMethod
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMetric
rdkit.Chem.FeatMaps.FeatMaps.FeatDirScoreMode
rdkit.Chem.FeatMaps.FeatMaps.FeatMap
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams.FeatProfile
rdkit.Chem.FeatMaps.FeatMaps.FeatMapScoreMode
rdkit.Chem.FilterCatalog.FilterMatcher
rdkit.Chem.Fingerprints.DbFpSupplier.DbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.ForwardDbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.RandomAccessDbFpSupplier
rdkit.Chem.Fingerprints.FingerprintMols.FingerprinterDetails
rdkit.Chem.Fingerprints.SimilarityScreener.SimilarityScreener
rdkit.Chem.Fingerprints.SimilarityScreener.ThresholdScreener
rdkit.Chem.Fingerprints.SimilarityScreener.TopNScreener
rdkit.Chem.FragmentCatalog.BitGainsInfo
rdkit.Chem.FragmentMatcher.FragmentMatcher
rdkit.Chem.FunctionalGroups.FGHierarchyNode
rdkit.Chem.FunctionalGroups.FuncGroupFileParseError
rdkit.Chem.MCS.MCSResult
rdkit.Chem.MolDb.FingerprintUtils.LayeredOptions
rdkit.Chem.MolDb.Loader_sa.Compound
rdkit.Chem.MolKey.InchiInfo.InchiInfo
rdkit.Chem.MolKey.MolKey.BadMoleculeException
rdkit.Chem.MolKey.MolKey.InchiResult
rdkit.Chem.MolKey.MolKey.MolIdentifierException
rdkit.Chem.MolKey.MolKey.MolKeyResult
rdkit.Chem.Pharm2D.LazyGenerator.Generator
rdkit.Chem.Pharm2D.Matcher.MatchError
rdkit.Chem.Pharm2D.SigFactory.SigFactory
rdkit.Chem.Pharm3D.ExcludedVolume.ExcludedVolume
rdkit.Chem.Pharm3D.Pharmacophore.ExplicitPharmacophore
rdkit.Chem.Pharm3D.Pharmacophore.Pharmacophore
rdkit.Chem.PropertyMol.PropertyMol
rdkit.Chem.PyMol.MolViewer
rdkit.Chem.QED.ADSparameter
rdkit.Chem.QED.QEDproperties
rdkit.Chem.Recap.RecapHierarchyNode
rdkit.Chem.SaltRemover.InputFormat
rdkit.Chem.SaltRemover.SaltRemover
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAligner
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAlignment
rdkit.Chem.Subshape.SubshapeAligner.SubshapeDistanceMetric
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeBuilder
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeCombineOperations
rdkit.Chem.Subshape.SubshapeObjects.ShapeWithSkeleton
rdkit.Chem.Subshape.SubshapeObjects.SkeletonPoint
rdkit.Chem.Subshape.SubshapeObjects.SubshapeShape
rdkit.Chem.Suppliers.DbMolSupplier.DbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.ForwardDbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.RandomAccessDbMolSupplier
rdkit.Chem.Suppliers.MolSupplier.MolSupplier
rdkit.Chem.fmcs.fmcs'.Atom
rdkit.Chem.fmcs.fmcs'.AtomSmartsNoAromaticity
rdkit.Chem.fmcs.fmcs'.Bond
rdkit.Chem.fmcs.fmcs'.CachingTargetsMatcher
rdkit.Chem.fmcs.fmcs'.CangenNode
rdkit.Chem.fmcs.fmcs'.Default
rdkit.Chem.fmcs.fmcs'.DirectedEdge
rdkit.Chem.fmcs.fmcs'.EnumerationMolecule
rdkit.Chem.fmcs.fmcs'.FragmentedTypedMolecule
rdkit.Chem.fmcs.fmcs'.MCSResult
rdkit.Chem.fmcs.fmcs'.OutgoingEdge
rdkit.Chem.fmcs.fmcs'.SingleBestAtoms
rdkit.Chem.fmcs.fmcs'.SingleBestAtomsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs'.SingleBestBonds
rdkit.Chem.fmcs.fmcs'.SingleBestBondsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs'.Subgraph
rdkit.Chem.fmcs.fmcs'.Timer
rdkit.Chem.fmcs.fmcs'.TypedFragment
rdkit.Chem.fmcs.fmcs'.TypedMolecule
rdkit.Chem.fmcs.fmcs'.Uniquer
rdkit.Chem.fmcs.fmcs'.VerboseCachingTargetsMatcher
rdkit.Chem.fmcs.fmcs'.VerboseHeapOps
rdkit.Chem.fmcs.fmcs'._SingleBest
rdkit.Chem.fmcs.fmcs'.starting_from
rdkit.Chem.inchi.InchiReadWriteError
rdkit.Chem.rdChemReactions.CartesianProductStrategy
rdkit.Chem.rdChemReactions.ChemicalReaction
rdkit.Chem.rdChemReactions.EnumerateLibrary
rdkit.Chem.rdChemReactions.EnumerateLibraryBase
rdkit.Chem.rdChemReactions.EnumerationParams
rdkit.Chem.rdChemReactions.EnumerationStrategyBase
rdkit.Chem.rdChemReactions.EvenSamplePairsStrategy
rdkit.Chem.rdChemReactions.FingerprintType
rdkit.Chem.rdChemReactions.ROMolList
rdkit.Chem.rdChemReactions.RandomSampleAllBBsStrategy
rdkit.Chem.rdChemReactions.RandomSampleStrategy
rdkit.Chem.rdChemReactions.ReactionFingerprintParams
rdkit.Chem.rdChemReactions.SanitizeFlags
rdkit.Chem.rdChemReactions.VectMolVect
rdkit.Chem.rdChemReactions.VectSizeT
rdkit.Chem.rdChemReactions.VectorOfStringVectors
rdkit.Chem.rdChemicalFeatures.FreeChemicalFeature
rdkit.Chem.rdDistGeom.EmbedParameters
rdkit.Chem.rdFMCS.AtomCompare
rdkit.Chem.rdFMCS.BondCompare
rdkit.Chem.rdFMCS.MCSAtomCompareParameters
rdkit.Chem.rdFMCS.MCSBondCompareParameters
rdkit.Chem.rdFMCS.MCSParameters
rdkit.Chem.rdFMCS.MCSResult
rdkit.Chem.rdMolAlign.O3A
rdkit.Chem.rdMolCatalog.MolCatalog
rdkit.Chem.rdMolCatalog.MolCatalogEntry
rdkit.Chem.rdMolChemicalFeatures.MolChemicalFeature
rdkit.Chem.rdMolChemicalFeatures.MolChemicalFeatureFactory
rdkit.Chem.rdMolDescriptors.AtomPairsParameters
rdkit.Chem.rdMolDescriptors.NumRotatableBondsOptions
rdkit.Chem.rdMolDescriptors.Properties
rdkit.Chem.rdMolDescriptors.PropertyFunctor
rdkit.Chem.rdMolDescriptors.PropertyRangeQuery
rdkit.Chem.rdMolDescriptors.PythonPropertyFunctor
rdkit.Chem.rdRGroupDecomposition.MOL_SPTR_VECT
rdkit.Chem.rdRGroupDecomposition.RGroupCoreAlignment
rdkit.Chem.rdRGroupDecomposition.RGroupDecomposition
rdkit.Chem.rdRGroupDecomposition.RGroupDecompositionParameters
rdkit.Chem.rdRGroupDecomposition.RGroupLabelling
rdkit.Chem.rdRGroupDecomposition.RGroupLabels
rdkit.Chem.rdRGroupDecomposition.RGroupMatching
rdkit.Chem.rdStructChecker.StructChecker
rdkit.Chem.rdStructChecker.StructCheckerOptions
rdkit.Chem.rdStructChecker.StructureFlags
rdkit.Chem.rdSubstructLibrary.CachedMolHolder
rdkit.Chem.rdSubstructLibrary.CachedSmilesMolHolder
rdkit.Chem.rdSubstructLibrary.CachedTrustedSmilesMolHolder
rdkit.Chem.rdSubstructLibrary.FPHolderBase
rdkit.Chem.rdSubstructLibrary.MolHolder
rdkit.Chem.rdSubstructLibrary.MolHolderBase
rdkit.Chem.rdSubstructLibrary.PatternHolder
rdkit.Chem.rdSubstructLibrary.SubstructLibrary
rdkit.Chem.rdchem.Atom
rdkit.Chem.rdchem.AtomMonomerInfo
rdkit.Chem.rdchem.AtomMonomerType
rdkit.Chem.rdchem.AtomPDBResidueInfo
rdkit.Chem.rdchem.Bond
rdkit.Chem.rdchem.BondDir
rdkit.Chem.rdchem.BondStereo
rdkit.Chem.rdchem.BondType
rdkit.Chem.rdchem.ChiralType
rdkit.Chem.rdchem.CompositeQueryType
rdkit.Chem.rdchem.Conformer
rdkit.Chem.rdchem.EditableMol
rdkit.Chem.rdchem.HybridizationType
rdkit.Chem.rdchem.Mol
rdkit.Chem.rdchem.MolBundle
rdkit.Chem.rdchem.PeriodicTable
rdkit.Chem.rdchem.PropertyPickleOptions
rdkit.Chem.rdchem.QueryAtom
rdkit.Chem.rdchem.QueryBond
rdkit.Chem.rdchem.RWMol
rdkit.Chem.rdchem.ResonanceFlags
rdkit.Chem.rdchem.ResonanceMolSupplier
rdkit.Chem.rdchem.RingInfo
rdkit.Chem.rdchem._ROAtomSeq
rdkit.Chem.rdchem._ROBondSeq
rdkit.Chem.rdchem._ROQAtomSeq
rdkit.Chem.rdchem._listPN5RDKit4AtomE
rdkit.Chem.rdchem._listPN5RDKit4BondE
rdkit.Chem.rdfiltercatalog.ExclusionList
rdkit.Chem.rdfiltercatalog.FilterCatalog
rdkit.Chem.rdfiltercatalog.FilterCatalogEntry
rdkit.Chem.rdfiltercatalog.FilterCatalogEntryList
rdkit.Chem.rdfiltercatalog.FilterCatalogParams
rdkit.Chem.rdfiltercatalog.FilterCatalogParams.FilterCatalogs
rdkit.Chem.rdfiltercatalog.FilterHierarchyMatcher
rdkit.Chem.rdfiltercatalog.FilterMatch
rdkit.Chem.rdfiltercatalog.FilterMatcherBase
rdkit.Chem.rdfiltercatalog.IntPair
rdkit.Chem.rdfiltercatalog.MatchTypeVect
rdkit.Chem.rdfiltercatalog.MolList
rdkit.Chem.rdfiltercatalog.PythonFilterMatcher
rdkit.Chem.rdfiltercatalog.SmartsMatcher
rdkit.Chem.rdfiltercatalog.VectFilterMatch
rdkit.Chem.rdfragcatalog.FragCatGenerator
rdkit.Chem.rdfragcatalog.FragCatParams
rdkit.Chem.rdfragcatalog.FragCatalog
rdkit.Chem.rdfragcatalog.FragFPGenerator
rdkit.Chem.rdmolfiles.ForwardSDMolSupplier
rdkit.Chem.rdmolfiles.PDBWriter
rdkit.Chem.rdmolfiles.SDMolSupplier
rdkit.Chem.rdmolfiles.SDWriter
rdkit.Chem.rdmolfiles.SmilesMolSupplier
rdkit.Chem.rdmolfiles.SmilesParserParams
rdkit.Chem.rdmolfiles.SmilesWriter
rdkit.Chem.rdmolfiles.TDTMolSupplier
rdkit.Chem.rdmolfiles.TDTWriter
rdkit.Chem.rdmolops.AdjustQueryParameters
rdkit.Chem.rdmolops.AdjustQueryWhichFlags
rdkit.Chem.rdmolops.AromaticityModel
rdkit.Chem.rdmolops.SanitizeFlags
rdkit.DataStructs.BitEnsemble.BitEnsemble
rdkit.DataStructs.HierarchyVis.VisOpts
rdkit.DataStructs.LazySignature.LazySig
rdkit.DataStructs.TopNContainer.TopNContainer
rdkit.DataStructs.VectCollection.VectCollection
rdkit.DataStructs.cDataStructs.DiscreteValueType
rdkit.DataStructs.cDataStructs.DiscreteValueVect
rdkit.DataStructs.cDataStructs.ExplicitBitVect
rdkit.DataStructs.cDataStructs.FPBReader
rdkit.DataStructs.cDataStructs.IntSparseIntVect
rdkit.DataStructs.cDataStructs.LongSparseIntVect
rdkit.DataStructs.cDataStructs.MultiFPBReader
rdkit.DataStructs.cDataStructs.SparseBitVect
rdkit.DataStructs.cDataStructs.UIntSparseIntVect
rdkit.DataStructs.cDataStructs.ULongSparseIntVect
rdkit.Dbase.DbConnection.DbConnect
rdkit.Dbase.DbConnection.DbError
rdkit.Dbase.DbReport.CDXImageTransformer
rdkit.Dbase.DbReport.CactvsImageTransformer
rdkit.Dbase.DbReport.RDImageTransformer
rdkit.Dbase.DbReport.ReportLabImageTransformer
rdkit.Dbase.DbResultSet.DbResultBase
rdkit.Dbase.DbResultSet.DbResultSet
rdkit.Dbase.DbResultSet.RandomAccessDbResultSet
rdkit.ForceField.rdForceField.ForceField
rdkit.ForceField.rdForceField.MMFFMolProperties
rdkit.Geometry.rdGeometry.Point2D
rdkit.Geometry.rdGeometry.Point3D
rdkit.Geometry.rdGeometry.PointND
rdkit.Geometry.rdGeometry.UniformGrid3D_
rdkit.ML.Cluster.ClusterVis.ClusterRenderer
rdkit.ML.Cluster.ClusterVis.VisOpts
rdkit.ML.Cluster.Clusters.Cluster
rdkit.ML.Composite.BayesComposite.BayesComposite
rdkit.ML.Composite.Composite.Composite
rdkit.ML.CompositeRun.CompositeRun
rdkit.ML.Data.MLData.MLDataSet
rdkit.ML.Data.MLData.MLQuantDataSet
rdkit.ML.DecTree.DecTree.DecTreeNode
rdkit.ML.DecTree.Forest.Forest
rdkit.ML.DecTree.QuantTree.QuantTreeNode
rdkit.ML.DecTree.SigTree.SigTreeNode
rdkit.ML.DecTree.Tree.TreeNode
rdkit.ML.DecTree.TreeVis.VisOpts
rdkit.ML.Descriptors.CompoundDescriptors.CompoundDescriptorCalculator
rdkit.ML.Descriptors.Descriptors.DescriptorCalculator
rdkit.ML.Descriptors.MoleculeDescriptors.MolecularDescriptorCalculator
rdkit.ML.InfoTheory.BitClusterer.BitClusterer
rdkit.ML.InfoTheory.rdInfoTheory.BitCorrMatGenerator
rdkit.ML.InfoTheory.rdInfoTheory.InfoBitRanker
rdkit.ML.InfoTheory.rdInfoTheory.InfoType
rdkit.ML.KNN.KNNClassificationModel.KNNClassificationModel
rdkit.ML.KNN.KNNModel.KNNModel
rdkit.ML.KNN.KNNRegressionModel.KNNRegressionModel
rdkit.ML.ModelPackage.Packager.ClassificationError
rdkit.ML.ModelPackage.Packager.DescriptorCalculationError
rdkit.ML.ModelPackage.Packager.ModelPackage
rdkit.ML.NaiveBayes.ClassificationModel.NaiveBayesClassifier
rdkit.ML.Neural.ActFuncs.ActFunc
rdkit.ML.Neural.ActFuncs.Sigmoid
rdkit.ML.Neural.ActFuncs.TanH
rdkit.ML.Neural.NetNode.NetNode
rdkit.ML.Neural.Network.Network
rdkit.ML.Neural.Trainers.BackProp
rdkit.ML.Neural.Trainers.Trainer
rdkit.ML.files.ReFile
rdkit.SimDivFilters.SimilarityPickers.GenericPicker
rdkit.SimDivFilters.SimilarityPickers.SpreadPicker
rdkit.SimDivFilters.SimilarityPickers.TopNOverallPicker
rdkit.SimDivFilters.rdSimDivPickers.ClusterMethod
rdkit.SimDivFilters.rdSimDivPickers.HierarchicalClusterPicker
rdkit.SimDivFilters.rdSimDivPickers.MaxMinPicker
rdkit.VLib.Filter.FilterNode
rdkit.VLib.Node.VLibNode
rdkit.VLib.NodeLib.DbMolSupply.DbMolSupplyNode
rdkit.VLib.NodeLib.DbPickleSupplier.DbPickleSupplyNode
rdkit.VLib.NodeLib.DbPickleSupplier._lazyDataSeq
rdkit.VLib.NodeLib.SDSupply.SDSupplyNode
rdkit.VLib.NodeLib.SmartsMolFilter.SmartsFilter
rdkit.VLib.NodeLib.SmartsRemover.SmartsRemover
rdkit.VLib.NodeLib.SmilesDupeFilter.DupeFilter
rdkit.VLib.NodeLib.SmilesOutput.OutputNode
rdkit.VLib.NodeLib.SmilesSupply.SmilesSupplyNode
rdkit.VLib.Output.OutputNode
rdkit.VLib.Supply.SupplyNode
rdkit.VLib.Transform.TransformNode
rdkit.rdBase._listSt6vectorIiSaIiEE
rdkit.rdBase._listi
rdkit.rdBase._vectSs
rdkit.rdBase._vectSt6vectorIdSaIdEE
rdkit.rdBase._vectSt6vectorIiSaIiEE
rdkit.rdBase._vectSt6vectorIjSaIjEE
rdkit.rdBase._vectd
rdkit.rdBase._vecti
rdkit.rdBase._vectj
rdkit.rdBase.ostream
rdkit.rdBase.std_ostream
rdkit.rdBase.streambuf

All Functions

RDRandom.random
rdkit.Avalon.pyAvalonTools.CheckMolecule
rdkit.Avalon.pyAvalonTools.CheckMoleculeString
rdkit.Avalon.pyAvalonTools.CloseCheckMolFiles
rdkit.Avalon.pyAvalonTools.Generate2DCoords
rdkit.Avalon.pyAvalonTools.GetAvalonCountFP
rdkit.Avalon.pyAvalonTools.GetAvalonFP
rdkit.Avalon.pyAvalonTools.GetAvalonFPAsWords
rdkit.Avalon.pyAvalonTools.GetCanonSmiles
rdkit.Avalon.pyAvalonTools.GetCheckMolLog
rdkit.Avalon.pyAvalonTools.InitializeCheckMol
rdkit.Chem.AllChem.AssignBondOrdersFromTemplate
rdkit.Chem.AllChem.ComputeMolShape
rdkit.Chem.AllChem.ComputeMolVolume
rdkit.Chem.AllChem.ConstrainedEmbed
rdkit.Chem.AllChem.EnumerateLibraryFromReaction
rdkit.Chem.AllChem.GetConformerRMS
rdkit.Chem.AllChem.GetConformerRMSMatrix
rdkit.Chem.AllChem.TransformMol
rdkit.Chem.AllChem._runDoctests
rdkit.Chem.AtomPairs.Pairs.ExplainPairScore
rdkit.Chem.AtomPairs.Pairs.GetAtomPairFingerprintAsBitVect
rdkit.Chem.AtomPairs.Pairs._runDoctests
rdkit.Chem.AtomPairs.Pairs.pyScorePair
rdkit.Chem.AtomPairs.Sheridan.AssignPattyTypes
rdkit.Chem.AtomPairs.Sheridan.GetBPFingerprint
rdkit.Chem.AtomPairs.Sheridan.GetBTFingerprint
rdkit.Chem.AtomPairs.Sheridan._readPattyDefs
rdkit.Chem.AtomPairs.Sheridan._runDoctests
rdkit.Chem.AtomPairs.Torsions.ExplainPathScore
rdkit.Chem.AtomPairs.Torsions.GetTopologicalTorsionFingerprintAsIds
rdkit.Chem.AtomPairs.Torsions._runDoctests
rdkit.Chem.AtomPairs.Torsions.pyScorePath
rdkit.Chem.AtomPairs.Utils.BitsInCommon
rdkit.Chem.AtomPairs.Utils.CosineSimilarity
rdkit.Chem.AtomPairs.Utils.DiceSimilarity
rdkit.Chem.AtomPairs.Utils.Dot
rdkit.Chem.AtomPairs.Utils.ExplainAtomCode
rdkit.Chem.AtomPairs.Utils.NumPiElectrons
rdkit.Chem.AtomPairs.Utils._runDoctests
rdkit.Chem.BRICS.BRICSBuild
rdkit.Chem.BRICS.BRICSDecompose
rdkit.Chem.BRICS.BreakBRICSBonds
rdkit.Chem.BRICS.FindBRICSBonds
rdkit.Chem.BRICS._test
rdkit.Chem.BuildFragmentCatalog.BuildCatalog
rdkit.Chem.BuildFragmentCatalog.CalcGains
rdkit.Chem.BuildFragmentCatalog.CalcGainsFromFps
rdkit.Chem.BuildFragmentCatalog.OutputGainsData
rdkit.Chem.BuildFragmentCatalog.ParseArgs
rdkit.Chem.BuildFragmentCatalog.ProcessGainsData
rdkit.Chem.BuildFragmentCatalog.ScoreFromLists
rdkit.Chem.BuildFragmentCatalog.ScoreMolecules
rdkit.Chem.BuildFragmentCatalog.ShowDetails
rdkit.Chem.BuildFragmentCatalog.SupplierFromDetails
rdkit.Chem.BuildFragmentCatalog.Usage
rdkit.Chem.BuildFragmentCatalog.message
rdkit.Chem.CanonSmiles
rdkit.Chem.ChemUtils.AlignDepict.AlignDepict
rdkit.Chem.ChemUtils.AlignDepict.initParser
rdkit.Chem.ChemUtils.AlignDepict.main
rdkit.Chem.ChemUtils.AlignDepict.processArgs
rdkit.Chem.ChemUtils.BulkTester.TestMolecule
rdkit.Chem.ChemUtils.BulkTester.TestSupplier
rdkit.Chem.ChemUtils.DescriptorUtilities.setDescriptorVersion
rdkit.Chem.ChemUtils.SDFToCSV.Convert
rdkit.Chem.ChemUtils.SDFToCSV.existingFile
rdkit.Chem.ChemUtils.SDFToCSV.initParser
rdkit.Chem.ChemUtils.SDFToCSV.main
rdkit.Chem.ChemUtils.TemplateExpand.ConstructSidechains
rdkit.Chem.ChemUtils.TemplateExpand.Explode
rdkit.Chem.ChemUtils.TemplateExpand.MoveDummyNeighborsToBeginning
rdkit.Chem.ChemUtils.TemplateExpand.Usage
rdkit.Chem.ChemUtils.TemplateExpand._exploder
rdkit.Chem.ChemicalFeatures.MCFF_GetFeaturesForMol
rdkit.Chem.Crippen.MolLogP
rdkit.Chem.Crippen.MolMR
rdkit.Chem.Crippen._Init
rdkit.Chem.Crippen._ReadPatts
rdkit.Chem.Crippen._pyGetAtomContribs
rdkit.Chem.Crippen._pyMolLogP
rdkit.Chem.Crippen._pyMolMR
rdkit.Chem.Descriptors.ExactMolWt
rdkit.Chem.Descriptors.FpDensityMorgan1
rdkit.Chem.Descriptors.FpDensityMorgan2
rdkit.Chem.Descriptors.FpDensityMorgan3
rdkit.Chem.Descriptors.HeavyAtomMolWt
rdkit.Chem.Descriptors.MaxAbsPartialCharge
rdkit.Chem.Descriptors.MaxPartialCharge
rdkit.Chem.Descriptors.MinAbsPartialCharge
rdkit.Chem.Descriptors.MinPartialCharge
rdkit.Chem.Descriptors.MolWt
rdkit.Chem.Descriptors.NumRadicalElectrons
rdkit.Chem.Descriptors.NumValenceElectrons
rdkit.Chem.Descriptors._ChargeDescriptors
rdkit.Chem.Descriptors._FingerprintDensity
rdkit.Chem.Descriptors._isCallable
rdkit.Chem.Descriptors._runDoctests
rdkit.Chem.Descriptors._setupDescriptors
rdkit.Chem.Descriptors3D.Asphericity
rdkit.Chem.Descriptors3D.Eccentricity
rdkit.Chem.Descriptors3D.InertialShapeFactor
rdkit.Chem.Descriptors3D.NPR1
rdkit.Chem.Descriptors3D.NPR2
rdkit.Chem.Descriptors3D.PMI1
rdkit.Chem.Descriptors3D.PMI2
rdkit.Chem.Descriptors3D.PMI3
rdkit.Chem.Descriptors3D.RadiusOfGyration
rdkit.Chem.Descriptors3D.SpherocityIndex
rdkit.Chem.Draw.IPythonConsole.InstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole.ShowMols
rdkit.Chem.Draw.IPythonConsole.UninstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole._GetSubstructMatch
rdkit.Chem.Draw.IPythonConsole._GetSubstructMatches
rdkit.Chem.Draw.IPythonConsole._toJSON
rdkit.Chem.Draw.IPythonConsole._toPNG
rdkit.Chem.Draw.IPythonConsole._toReactionPNG
rdkit.Chem.Draw.IPythonConsole._toReactionSVG
rdkit.Chem.Draw.IPythonConsole._toSVG
rdkit.Chem.Draw.IPythonConsole.addMolToView
rdkit.Chem.Draw.IPythonConsole.display_pil_image
rdkit.Chem.Draw.IPythonConsole.drawMol3D
rdkit.Chem.Draw.MolToFile
rdkit.Chem.Draw.MolToImage
rdkit.Chem.Draw.MolToImageFile
rdkit.Chem.Draw.MolToMPL
rdkit.Chem.Draw.MolToQPixmap
rdkit.Chem.Draw.MolsToGridImage
rdkit.Chem.Draw.MolsToImage
rdkit.Chem.Draw.ReactionToImage
rdkit.Chem.Draw.ShowMol
rdkit.Chem.Draw.SimilarityMaps.GetAPFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForModel
rdkit.Chem.Draw.SimilarityMaps.GetMorganFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetRDKFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForModel
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapFromWeights
rdkit.Chem.Draw.SimilarityMaps.GetStandardizedWeights
rdkit.Chem.Draw.SimilarityMaps.GetTTFingerprint
rdkit.Chem.Draw._MolsToGridImage
rdkit.Chem.Draw._MolsToGridSVG
rdkit.Chem.Draw._createCanvas
rdkit.Chem.Draw._drawerToImage
rdkit.Chem.Draw._getCanvas
rdkit.Chem.Draw._legacyReactionToImage
rdkit.Chem.Draw._moltoSVG
rdkit.Chem.Draw._moltoimg
rdkit.Chem.Draw._okToKekulizeMol
rdkit.Chem.Draw.aggCanvas.convertColor
rdkit.Chem.Draw.calcAtomGaussians
rdkit.Chem.Draw.rdMolDraw2D.PrepareMolForDrawing
rdkit.Chem.Draw.spingCanvas.convertColor
rdkit.Chem.EState.AtomTypes.BuildPatts
rdkit.Chem.EState.AtomTypes.TypeAtoms
rdkit.Chem.EState.EState.EStateIndices
rdkit.Chem.EState.EState.GetPrincipleQuantumNumber
rdkit.Chem.EState.EState.MaxAbsEStateIndex
rdkit.Chem.EState.EState.MaxEStateIndex
rdkit.Chem.EState.EState.MinAbsEStateIndex
rdkit.Chem.EState.EState.MinEStateIndex
rdkit.Chem.EState.EState._exampleCode
rdkit.Chem.EState.EState_VSA.EState_VSA1
rdkit.Chem.EState.EState_VSA.EState_VSA10
rdkit.Chem.EState.EState_VSA.EState_VSA11
rdkit.Chem.EState.EState_VSA.EState_VSA2
rdkit.Chem.EState.EState_VSA.EState_VSA3
rdkit.Chem.EState.EState_VSA.EState_VSA4
rdkit.Chem.EState.EState_VSA.EState_VSA5
rdkit.Chem.EState.EState_VSA.EState_VSA6
rdkit.Chem.EState.EState_VSA.EState_VSA7
rdkit.Chem.EState.EState_VSA.EState_VSA8
rdkit.Chem.EState.EState_VSA.EState_VSA9
rdkit.Chem.EState.EState_VSA.EState_VSA_
rdkit.Chem.EState.EState_VSA.VSA_EState1
rdkit.Chem.EState.EState_VSA.VSA_EState10
rdkit.Chem.EState.EState_VSA.VSA_EState2
rdkit.Chem.EState.EState_VSA.VSA_EState3
rdkit.Chem.EState.EState_VSA.VSA_EState4
rdkit.Chem.EState.EState_VSA.VSA_EState5
rdkit.Chem.EState.EState_VSA.VSA_EState6
rdkit.Chem.EState.EState_VSA.VSA_EState7
rdkit.Chem.EState.EState_VSA.VSA_EState8
rdkit.Chem.EState.EState_VSA.VSA_EState9
rdkit.Chem.EState.EState_VSA.VSA_EState_
rdkit.Chem.EState.EState_VSA._InstallDescriptors
rdkit.Chem.EState.EState_VSA._descriptorDocstring
rdkit.Chem.EState.EState_VSA._descriptor_EState_VSA
rdkit.Chem.EState.EState_VSA._descriptor_VSA_EState
rdkit.Chem.EState.Fingerprinter.FingerprintMol
rdkit.Chem.EState.Fingerprinter._exampleCode
rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
rdkit.Chem.EnumerateStereoisomers._getFlippers
rdkit.Chem.FeatFinderCLI.GetAtomFeatInfo
rdkit.Chem.FeatFinderCLI.existingFile
rdkit.Chem.FeatFinderCLI.initParser
rdkit.Chem.FeatFinderCLI.main
rdkit.Chem.FeatFinderCLI.processArgs
rdkit.Chem.FeatMaps.FeatMapPoint._runDoctests
rdkit.Chem.FeatMaps.FeatMapUtils.CombineFeatMaps
rdkit.Chem.FeatMaps.FeatMapUtils.GetFeatFeatDistMatrix
rdkit.Chem.FeatMaps.FeatMapUtils.MergeFeatPoints
rdkit.Chem.FeatMaps.FeatMapUtils.__copyAll
rdkit.Chem.FeatMaps.FeatMapUtils.familiesMatch
rdkit.Chem.FeatMaps.FeatMapUtils.feq
rdkit.Chem.Features.FeatDirUtilsRD.ArbAxisRotation
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAromaticFeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD._GetTetrahedralFeatVect
rdkit.Chem.Features.FeatDirUtilsRD._checkPlanarity
rdkit.Chem.Features.FeatDirUtilsRD._findAvgVec
rdkit.Chem.Features.FeatDirUtilsRD._findHydAtoms
rdkit.Chem.Features.FeatDirUtilsRD.cross
rdkit.Chem.Features.FeatDirUtilsRD.findNeighbors
rdkit.Chem.Features.ShowFeats.ShowArrow
rdkit.Chem.Features.ShowFeats.ShowMolFeats
rdkit.Chem.Features.ShowFeats._buildCanonArrowhead
rdkit.Chem.Features.ShowFeats._cgoArrowhead
rdkit.Chem.Features.ShowFeats._getVectNormal
rdkit.Chem.FindMolChiralCenters
rdkit.Chem.Fingerprints.ClusterMols.ClusterFromDetails
rdkit.Chem.Fingerprints.ClusterMols.ClusterPoints
rdkit.Chem.Fingerprints.ClusterMols.GetDistanceMatrix
rdkit.Chem.Fingerprints.DbFpSupplier._runDoctests
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintMol
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromDetails
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromMols
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromPickles
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromSmiles
rdkit.Chem.Fingerprints.FingerprintMols.FoldFingerprintToTargetDensity
rdkit.Chem.Fingerprints.FingerprintMols.GetRDKFingerprint
rdkit.Chem.Fingerprints.FingerprintMols.ParseArgs
rdkit.Chem.Fingerprints.FingerprintMols.Usage
rdkit.Chem.Fingerprints.FingerprintMols.error
rdkit.Chem.Fingerprints.FingerprintMols.message
rdkit.Chem.Fingerprints.MolSimilarity.GetFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFromDetails
rdkit.Chem.Fingerprints.MolSimilarity.ScreenInDb
rdkit.Chem.Fingerprints.MolSimilarity._ConstructSQL
rdkit.Chem.Fraggle.FraggleSim.GetFraggleSimilarity
rdkit.Chem.Fraggle.FraggleSim._runDoctests
rdkit.Chem.Fraggle.FraggleSim.atomContrib
rdkit.Chem.Fraggle.FraggleSim.compute_fraggle_similarity_for_subs
rdkit.Chem.Fraggle.FraggleSim.delete_bonds
rdkit.Chem.Fraggle.FraggleSim.generate_fraggle_fragmentation
rdkit.Chem.Fraggle.FraggleSim.isValidRingCut
rdkit.Chem.Fraggle.FraggleSim.select_fragments
rdkit.Chem.FragmentCatalog.BuildAdjacencyList
rdkit.Chem.FragmentCatalog.GetMolsMatchingBit
rdkit.Chem.FragmentCatalog.ProcessGainsFile
rdkit.Chem.FragmentCatalog.message
rdkit.Chem.FragmentMatcher._test
rdkit.Chem.Fragments._CountMatches
rdkit.Chem.Fragments._LoadPatterns
rdkit.Chem.Fragments.fr_Al_COO
rdkit.Chem.Fragments.fr_Al_OH
rdkit.Chem.Fragments.fr_Al_OH_noTert
rdkit.Chem.Fragments.fr_ArN
rdkit.Chem.Fragments.fr_Ar_COO
rdkit.Chem.Fragments.fr_Ar_N
rdkit.Chem.Fragments.fr_Ar_NH
rdkit.Chem.Fragments.fr_Ar_OH
rdkit.Chem.Fragments.fr_COO
rdkit.Chem.Fragments.fr_COO2
rdkit.Chem.Fragments.fr_C_O
rdkit.Chem.Fragments.fr_C_O_noCOO
rdkit.Chem.Fragments.fr_C_S
rdkit.Chem.Fragments.fr_HOCCN
rdkit.Chem.Fragments.fr_Imine
rdkit.Chem.Fragments.fr_NH0
rdkit.Chem.Fragments.fr_NH1
rdkit.Chem.Fragments.fr_NH2
rdkit.Chem.Fragments.fr_N_O
rdkit.Chem.Fragments.fr_Ndealkylation1
rdkit.Chem.Fragments.fr_Ndealkylation2
rdkit.Chem.Fragments.fr_Nhpyrrole
rdkit.Chem.Fragments.fr_SH
rdkit.Chem.Fragments.fr_aldehyde
rdkit.Chem.Fragments.fr_alkyl_carbamate
rdkit.Chem.Fragments.fr_alkyl_halide
rdkit.Chem.Fragments.fr_allylic_oxid
rdkit.Chem.Fragments.fr_amide
rdkit.Chem.Fragments.fr_amidine
rdkit.Chem.Fragments.fr_aniline
rdkit.Chem.Fragments.fr_aryl_methyl
rdkit.Chem.Fragments.fr_azide
rdkit.Chem.Fragments.fr_azo
rdkit.Chem.Fragments.fr_barbitur
rdkit.Chem.Fragments.fr_benzene
rdkit.Chem.Fragments.fr_benzodiazepine
rdkit.Chem.Fragments.fr_bicyclic
rdkit.Chem.Fragments.fr_diazo
rdkit.Chem.Fragments.fr_dihydropyridine
rdkit.Chem.Fragments.fr_epoxide
rdkit.Chem.Fragments.fr_ester
rdkit.Chem.Fragments.fr_ether
rdkit.Chem.Fragments.fr_furan
rdkit.Chem.Fragments.fr_guanido
rdkit.Chem.Fragments.fr_halogen
rdkit.Chem.Fragments.fr_hdrzine
rdkit.Chem.Fragments.fr_hdrzone
rdkit.Chem.Fragments.fr_imidazole
rdkit.Chem.Fragments.fr_imide
rdkit.Chem.Fragments.fr_isocyan
rdkit.Chem.Fragments.fr_isothiocyan
rdkit.Chem.Fragments.fr_ketone
rdkit.Chem.Fragments.fr_ketone_Topliss
rdkit.Chem.Fragments.fr_lactam
rdkit.Chem.Fragments.fr_lactone
rdkit.Chem.Fragments.fr_methoxy
rdkit.Chem.Fragments.fr_morpholine
rdkit.Chem.Fragments.fr_nitrile
rdkit.Chem.Fragments.fr_nitro
rdkit.Chem.Fragments.fr_nitro_arom
rdkit.Chem.Fragments.fr_nitro_arom_nonortho
rdkit.Chem.Fragments.fr_nitroso
rdkit.Chem.Fragments.fr_oxazole
rdkit.Chem.Fragments.fr_oxime
rdkit.Chem.Fragments.fr_para_hydroxylation
rdkit.Chem.Fragments.fr_phenol
rdkit.Chem.Fragments.fr_phenol_noOrthoHbond
rdkit.Chem.Fragments.fr_phos_acid
rdkit.Chem.Fragments.fr_phos_ester
rdkit.Chem.Fragments.fr_piperdine
rdkit.Chem.Fragments.fr_piperzine
rdkit.Chem.Fragments.fr_priamide
rdkit.Chem.Fragments.fr_prisulfonamd
rdkit.Chem.Fragments.fr_pyridine
rdkit.Chem.Fragments.fr_quatN
rdkit.Chem.Fragments.fr_sulfide
rdkit.Chem.Fragments.fr_sulfonamd
rdkit.Chem.Fragments.fr_sulfone
rdkit.Chem.Fragments.fr_term_acetylene
rdkit.Chem.Fragments.fr_tetrazole
rdkit.Chem.Fragments.fr_thiazole
rdkit.Chem.Fragments.fr_thiocyan
rdkit.Chem.Fragments.fr_thiophene
rdkit.Chem.Fragments.fr_unbrch_alkane
rdkit.Chem.Fragments.fr_urea
rdkit.Chem.FunctionalGroups.BuildFuncGroupHierarchy
rdkit.Chem.FunctionalGroups.CreateMolFingerprint
rdkit.Chem.FunctionalGroups._SetNodeBits
rdkit.Chem.GraphDescriptors.BalabanJ
rdkit.Chem.GraphDescriptors.BertzCT
rdkit.Chem.GraphDescriptors.Chi0
rdkit.Chem.GraphDescriptors.Chi0n
rdkit.Chem.GraphDescriptors.Chi0v
rdkit.Chem.GraphDescriptors.Chi1
rdkit.Chem.GraphDescriptors.Chi1n
rdkit.Chem.GraphDescriptors.Chi1v
rdkit.Chem.GraphDescriptors.Chi2n
rdkit.Chem.GraphDescriptors.Chi2v
rdkit.Chem.GraphDescriptors.Chi3n
rdkit.Chem.GraphDescriptors.Chi3v
rdkit.Chem.GraphDescriptors.Chi4n
rdkit.Chem.GraphDescriptors.Chi4v
rdkit.Chem.GraphDescriptors.ChiNn_
rdkit.Chem.GraphDescriptors.ChiNv_
rdkit.Chem.GraphDescriptors.HallKierAlpha
rdkit.Chem.GraphDescriptors.Ipc
rdkit.Chem.GraphDescriptors.Kappa1
rdkit.Chem.GraphDescriptors.Kappa2
rdkit.Chem.GraphDescriptors.Kappa3
rdkit.Chem.GraphDescriptors._AssignSymmetryClasses
rdkit.Chem.GraphDescriptors._CalculateEntropies
rdkit.Chem.GraphDescriptors._CreateBondDictEtc
rdkit.Chem.GraphDescriptors._GetCountDict
rdkit.Chem.GraphDescriptors._LookUpBondOrder
rdkit.Chem.GraphDescriptors._NumAdjacencies
rdkit.Chem.GraphDescriptors._VertexDegrees
rdkit.Chem.GraphDescriptors._hkDeltas
rdkit.Chem.GraphDescriptors._nVal
rdkit.Chem.GraphDescriptors._pyChi0n
rdkit.Chem.GraphDescriptors._pyChi0v
rdkit.Chem.GraphDescriptors._pyChi1n
rdkit.Chem.GraphDescriptors._pyChi1v
rdkit.Chem.GraphDescriptors._pyChi2n
rdkit.Chem.GraphDescriptors._pyChi2v
rdkit.Chem.GraphDescriptors._pyChi3n
rdkit.Chem.GraphDescriptors._pyChi3v
rdkit.Chem.GraphDescriptors._pyChi4n
rdkit.Chem.GraphDescriptors._pyChi4v
rdkit.Chem.GraphDescriptors._pyChiNn_
rdkit.Chem.GraphDescriptors._pyChiNv_
rdkit.Chem.GraphDescriptors._pyHallKierAlpha
rdkit.Chem.GraphDescriptors._pyKappa1
rdkit.Chem.GraphDescriptors._pyKappa2
rdkit.Chem.GraphDescriptors._pyKappa3
rdkit.Chem.Graphs.CharacteristicPolynomial
rdkit.Chem.Lipinski.FractionCSP3
rdkit.Chem.Lipinski.HeavyAtomCount
rdkit.Chem.Lipinski.NHOHCount
rdkit.Chem.Lipinski.NOCount
rdkit.Chem.Lipinski.NumAliphaticHeterocycles
rdkit.Chem.Lipinski.NumAliphaticRings
rdkit.Chem.Lipinski.NumAromaticCarbocycles
rdkit.Chem.Lipinski.NumAromaticHeterocycles
rdkit.Chem.Lipinski.NumAromaticRings
rdkit.Chem.Lipinski.NumHAcceptors
rdkit.Chem.Lipinski.NumHDonors
rdkit.Chem.Lipinski.NumHeteroatoms
rdkit.Chem.Lipinski.NumRotatableBonds
rdkit.Chem.Lipinski.NumSaturatedCarbocycles
rdkit.Chem.Lipinski.NumSaturatedHeterocycles
rdkit.Chem.Lipinski.NumSaturatedRings
rdkit.Chem.Lipinski.RingCount
rdkit.Chem.Lipinski._HAcceptors
rdkit.Chem.Lipinski._HDonors
rdkit.Chem.Lipinski._Heteroatoms
rdkit.Chem.Lipinski._RotatableBonds
rdkit.Chem.Lipinski._fn
rdkit.Chem.MACCSkeys._InitKeys
rdkit.Chem.MACCSkeys._pyGenMACCSKeys
rdkit.Chem.MACCSkeys._test
rdkit.Chem.MCS.FindMCS
rdkit.Chem.MCS._test
rdkit.Chem.MolDb.FingerprintUtils.BuildAtomPairFP
rdkit.Chem.MolDb.FingerprintUtils.BuildAvalonFP
rdkit.Chem.MolDb.FingerprintUtils.BuildMorganFP
rdkit.Chem.MolDb.FingerprintUtils.BuildPharm2DFP
rdkit.Chem.MolDb.FingerprintUtils.BuildRDKitFP
rdkit.Chem.MolDb.FingerprintUtils.BuildSigFactory
rdkit.Chem.MolDb.FingerprintUtils.BuildTorsionsFP
rdkit.Chem.MolDb.FingerprintUtils.DepickleFP
rdkit.Chem.MolDb.Loader_orig.ConvertRows
rdkit.Chem.MolDb.Loader_orig.LoadDb
rdkit.Chem.MolDb.Loader_orig.ProcessMol
rdkit.Chem.MolDb.Loader_sa.LoadDb
rdkit.Chem.MolDb.Loader_sa.ProcessMol
rdkit.Chem.MolDb.Loader_sa.RegisterSchema
rdkit.Chem.MolDb.Loader_sa._ConnectToSchema
rdkit.Chem.MolKey.InchiInfo._is_achiral_by_symmetry
rdkit.Chem.MolKey.MolKey.CheckCTAB
rdkit.Chem.MolKey.MolKey.ErrorBitsToText
rdkit.Chem.MolKey.MolKey.GetInchiForCTAB
rdkit.Chem.MolKey.MolKey.GetKeyForCTAB
rdkit.Chem.MolKey.MolKey._ctab_has_atoms
rdkit.Chem.MolKey.MolKey._ctab_remove_chiral_flag
rdkit.Chem.MolKey.MolKey._fix_all
rdkit.Chem.MolKey.MolKey._fix_chemdraw_header
rdkit.Chem.MolKey.MolKey._fix_line_ends
rdkit.Chem.MolKey.MolKey._get_bad_mol_identification_string
rdkit.Chem.MolKey.MolKey._get_chiral_identification_string
rdkit.Chem.MolKey.MolKey._get_identification_string
rdkit.Chem.MolKey.MolKey._get_null_mol_identification_string
rdkit.Chem.MolKey.MolKey._identify
rdkit.Chem.MolKey.MolKey._make_racemate_inchi
rdkit.Chem.MolKey.MolKey._runDoctests
rdkit.Chem.MolKey.MolKey.initStruchk
rdkit.Chem.MolSurf.LabuteASA
rdkit.Chem.MolSurf.PEOE_VSA1
rdkit.Chem.MolSurf.PEOE_VSA10
rdkit.Chem.MolSurf.PEOE_VSA11
rdkit.Chem.MolSurf.PEOE_VSA12
rdkit.Chem.MolSurf.PEOE_VSA13
rdkit.Chem.MolSurf.PEOE_VSA14
rdkit.Chem.MolSurf.PEOE_VSA2
rdkit.Chem.MolSurf.PEOE_VSA3
rdkit.Chem.MolSurf.PEOE_VSA4
rdkit.Chem.MolSurf.PEOE_VSA5
rdkit.Chem.MolSurf.PEOE_VSA6
rdkit.Chem.MolSurf.PEOE_VSA7
rdkit.Chem.MolSurf.PEOE_VSA8
rdkit.Chem.MolSurf.PEOE_VSA9
rdkit.Chem.MolSurf.SMR_VSA1
rdkit.Chem.MolSurf.SMR_VSA10
rdkit.Chem.MolSurf.SMR_VSA2
rdkit.Chem.MolSurf.SMR_VSA3
rdkit.Chem.MolSurf.SMR_VSA4
rdkit.Chem.MolSurf.SMR_VSA5
rdkit.Chem.MolSurf.SMR_VSA6
rdkit.Chem.MolSurf.SMR_VSA7
rdkit.Chem.MolSurf.SMR_VSA8
rdkit.Chem.MolSurf.SMR_VSA9
rdkit.Chem.MolSurf.SlogP_VSA1
rdkit.Chem.MolSurf.SlogP_VSA10
rdkit.Chem.MolSurf.SlogP_VSA11
rdkit.Chem.MolSurf.SlogP_VSA12
rdkit.Chem.MolSurf.SlogP_VSA2
rdkit.Chem.MolSurf.SlogP_VSA3
rdkit.Chem.MolSurf.SlogP_VSA4
rdkit.Chem.MolSurf.SlogP_VSA5
rdkit.Chem.MolSurf.SlogP_VSA6
rdkit.Chem.MolSurf.SlogP_VSA7
rdkit.Chem.MolSurf.SlogP_VSA8
rdkit.Chem.MolSurf.SlogP_VSA9
rdkit.Chem.MolSurf.TPSA
rdkit.Chem.MolSurf._InstallDescriptors
rdkit.Chem.MolSurf._LabuteHelper
rdkit.Chem.MolSurf._pyLabuteHelper
rdkit.Chem.MolSurf._pyTPSA
rdkit.Chem.MolSurf._pyTPSAContribs
rdkit.Chem.MolSurf.pyLabuteASA
rdkit.Chem.MolSurf.pyPEOE_VSA_
rdkit.Chem.MolSurf.pySMR_VSA_
rdkit.Chem.MolSurf.pySlogP_VSA_
rdkit.Chem.PandasTools.AddMoleculeColumnToFrame
rdkit.Chem.PandasTools.AddMurckoToFrame
rdkit.Chem.PandasTools.AlignMol
rdkit.Chem.PandasTools.AlignToScaffold
rdkit.Chem.PandasTools.ChangeMoleculeRendering
rdkit.Chem.PandasTools.FrameToGridImage
rdkit.Chem.PandasTools.InstallPandasTools
rdkit.Chem.PandasTools.LoadSDF
rdkit.Chem.PandasTools.PrintAsBase64PNGString
rdkit.Chem.PandasTools.PrintDefaultMolRep
rdkit.Chem.PandasTools.RemoveSaltsFromFrame
rdkit.Chem.PandasTools.RenderImagesInAllDataFrames
rdkit.Chem.PandasTools.SaveSMILESFromFrame
rdkit.Chem.PandasTools.SaveXlsxFromFrame
rdkit.Chem.PandasTools.UninstallPandasTools
rdkit.Chem.PandasTools.WriteSDF
rdkit.Chem.PandasTools._MolPlusFingerprint
rdkit.Chem.PandasTools._fingerprinter
rdkit.Chem.PandasTools._getPandasVersion
rdkit.Chem.PandasTools._get_image
rdkit.Chem.PandasTools._get_svg_image
rdkit.Chem.PandasTools._molge
rdkit.Chem.PandasTools._runDoctests
rdkit.Chem.PandasTools.patchPandasHTMLrepr
rdkit.Chem.PandasTools.patchPandasHeadMethod
rdkit.Chem.Pharm2D.DefaultSigFactory
rdkit.Chem.Pharm2D.Generate.Gen2DFingerprint
rdkit.Chem.Pharm2D.Generate._ShortestPathsMatch
rdkit.Chem.Pharm2D.Gobbi_Pharm2D._init
rdkit.Chem.Pharm2D.Matcher.GetAtomsMatchingBit
rdkit.Chem.Pharm2D.Matcher._exampleCode
rdkit.Chem.Pharm2D.Utils.BinsTriangleInequality
rdkit.Chem.Pharm2D.Utils.CountUpTo
rdkit.Chem.Pharm2D.Utils.GetAllCombinations
rdkit.Chem.Pharm2D.Utils.GetIndexCombinations
rdkit.Chem.Pharm2D.Utils.GetPossibleScaffolds
rdkit.Chem.Pharm2D.Utils.GetTriangles
rdkit.Chem.Pharm2D.Utils.GetUniqueCombinations
rdkit.Chem.Pharm2D.Utils.GetUniqueCombinations_new
rdkit.Chem.Pharm2D.Utils.NumCombinations
rdkit.Chem.Pharm2D.Utils.OrderTriangle
rdkit.Chem.Pharm2D.Utils.ScaffoldPasses
rdkit.Chem.Pharm2D.Utils.UniquifyCombinations
rdkit.Chem.Pharm2D.Utils._fact
rdkit.Chem.Pharm2D.Utils._runDoctests
rdkit.Chem.Pharm3D.EmbedLib.AddExcludedVolumes
rdkit.Chem.Pharm3D.EmbedLib.Check2DBounds
rdkit.Chem.Pharm3D.EmbedLib.CoarseScreenPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.CombiEnum
rdkit.Chem.Pharm3D.EmbedLib.ComputeChiralVolume
rdkit.Chem.Pharm3D.EmbedLib.ConstrainedEnum
rdkit.Chem.Pharm3D.EmbedLib.DownsampleBoundsMatrix
rdkit.Chem.Pharm3D.EmbedLib.EmbedMol
rdkit.Chem.Pharm3D.EmbedLib.EmbedOne
rdkit.Chem.Pharm3D.EmbedLib.EmbedPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.GetAllPharmacophoreMatches
rdkit.Chem.Pharm3D.EmbedLib.GetAtomHeavyNeighbors
rdkit.Chem.Pharm3D.EmbedLib.MatchFeatsToMol
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophoreToMol
rdkit.Chem.Pharm3D.EmbedLib.OptimizeMol
rdkit.Chem.Pharm3D.EmbedLib.ReplaceGroup
rdkit.Chem.Pharm3D.EmbedLib.UpdatePharmacophoreBounds
rdkit.Chem.Pharm3D.EmbedLib._checkMatch
rdkit.Chem.Pharm3D.EmbedLib._getFeatDict
rdkit.Chem.Pharm3D.EmbedLib._runDoctests
rdkit.Chem.Pharm3D.EmbedLib.isNaN
rdkit.Chem.PropertyMol._test
rdkit.Chem.QED._runDoctests
rdkit.Chem.QED.ads
rdkit.Chem.QED.default
rdkit.Chem.QED.properties
rdkit.Chem.QED.qed
rdkit.Chem.QED.weights_max
rdkit.Chem.QED.weights_mean
rdkit.Chem.QED.weights_none
rdkit.Chem.QuickSmartsMatch
rdkit.Chem.Randomize.CheckCanonicalization
rdkit.Chem.Randomize.RandomizeMol
rdkit.Chem.Randomize.RandomizeMolBlock
rdkit.Chem.Recap.RecapDecompose
rdkit.Chem.ReducedGraphs.TanimotoSimilarity
rdkit.Chem.SATIS.SATISTypes
rdkit.Chem.SaltRemover._getSmartsSaltsFromFile
rdkit.Chem.SaltRemover._getSmartsSaltsFromStream
rdkit.Chem.SaltRemover._runDoctests
rdkit.Chem.SaltRemover._smartsFromSmartsLine
rdkit.Chem.Scaffolds.MurckoScaffold.GetScaffoldForMol
rdkit.Chem.Scaffolds.MurckoScaffold.MakeScaffoldGeneric
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmiles
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmilesFromSmiles
rdkit.Chem.Scaffolds.MurckoScaffold._pyGetScaffoldForMol
rdkit.Chem.Scaffolds.MurckoScaffold._runDoctests
rdkit.Chem.SimpleEnum.Enumerator.EnumerateReaction
rdkit.Chem.SimpleEnum.Enumerator.PreprocessReaction
rdkit.Chem.SimpleEnum.Enumerator._runDoctests
rdkit.Chem.Subshape.BuilderUtils.AppendSkeletonPoints
rdkit.Chem.Subshape.BuilderUtils.AssignMolFeatsToPoints
rdkit.Chem.Subshape.BuilderUtils.CalculateDirectionsAtPoint
rdkit.Chem.Subshape.BuilderUtils.ClusterTerminalPts
rdkit.Chem.Subshape.BuilderUtils.ComputeGridIndices
rdkit.Chem.Subshape.BuilderUtils.ComputeShapeGridCentroid
rdkit.Chem.Subshape.BuilderUtils.ExpandTerminalPts
rdkit.Chem.Subshape.BuilderUtils.FindFarthestGridPoint
rdkit.Chem.Subshape.BuilderUtils.FindGridPointBetweenPoints
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromConformer
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromShape
rdkit.Chem.Subshape.BuilderUtils.GetMoreTerminalPoints
rdkit.Chem.Subshape.SubshapeAligner.ClusterAlignments
rdkit.Chem.Subshape.SubshapeAligner.GetShapeShapeDistance
rdkit.Chem.Subshape.SubshapeAligner.TransformMol
rdkit.Chem.Subshape.SubshapeAligner._getAllTriangles
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshape
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshapeSkeleton
rdkit.Chem.Subshape.SubshapeObjects._displaySubshapeSkelPt
rdkit.Chem.SupplierFromFilename
rdkit.Chem.Suppliers.DbMolSupplier.warning
rdkit.Chem.TemplateAlign.AlignMolToTemplate2D
rdkit.Chem.TemplateAlign._test
rdkit.Chem.TorsionFingerprints.CalculateTFD
rdkit.Chem.TorsionFingerprints.CalculateTorsionAngles
rdkit.Chem.TorsionFingerprints.CalculateTorsionLists
rdkit.Chem.TorsionFingerprints.CalculateTorsionWeights
rdkit.Chem.TorsionFingerprints.GetTFDBetweenConformers
rdkit.Chem.TorsionFingerprints.GetTFDBetweenMolecules
rdkit.Chem.TorsionFingerprints.GetTFDMatrix
rdkit.Chem.TorsionFingerprints._calculateBeta
rdkit.Chem.TorsionFingerprints._doMatch
rdkit.Chem.TorsionFingerprints._doMatchExcept1
rdkit.Chem.TorsionFingerprints._doNotMatch
rdkit.Chem.TorsionFingerprints._findCentralBond
rdkit.Chem.TorsionFingerprints._getAtomInvariantsWithRadius
rdkit.Chem.TorsionFingerprints._getBondsForTorsions
rdkit.Chem.TorsionFingerprints._getHeavyAtomNeighbors
rdkit.Chem.TorsionFingerprints._getIndexforTorsion
rdkit.Chem.TorsionFingerprints._getSameAtomOrder
rdkit.Chem.TorsionFingerprints._getTorsionAtomPositions
rdkit.Chem._test
rdkit.Chem.fmcs.fmcs'.MATCH
rdkit.Chem.fmcs.fmcs'._Counter
rdkit.Chem.fmcs.fmcs'._MolToSDBlock
rdkit.Chem.fmcs.fmcs'._check_atom_classes
rdkit.Chem.fmcs.fmcs'._copy_sd_tags
rdkit.Chem.fmcs.fmcs'._get_match_bond_indices
rdkit.Chem.fmcs.fmcs'._get_nth_prime
rdkit.Chem.fmcs.fmcs'._get_threshold_count
rdkit.Chem.fmcs.fmcs'._save_other_tags
rdkit.Chem.fmcs.fmcs'._update_times
rdkit.Chem.fmcs.fmcs'.all_subgraph_extensions
rdkit.Chem.fmcs.fmcs'.assign_isotopes_from_class_tag
rdkit.Chem.fmcs.fmcs'.atom_typer_any
rdkit.Chem.fmcs.fmcs'.atom_typer_isotopes
rdkit.Chem.fmcs.fmcs'.bond_typer_any
rdkit.Chem.fmcs.fmcs'.canon
rdkit.Chem.fmcs.fmcs'.check_completeRingsOnly
rdkit.Chem.fmcs.fmcs'.compute_mcs
rdkit.Chem.fmcs.fmcs'.convert_input_to_typed_molecules
rdkit.Chem.fmcs.fmcs'.default_atom_typer
rdkit.Chem.fmcs.fmcs'.default_bond_typer
rdkit.Chem.fmcs.fmcs'.enumerate_subgraphs
rdkit.Chem.fmcs.fmcs'.find_duplicates
rdkit.Chem.fmcs.fmcs'.find_extension_size
rdkit.Chem.fmcs.fmcs'.find_extensions
rdkit.Chem.fmcs.fmcs'.find_upper_fragment_size_limits
rdkit.Chem.fmcs.fmcs'.fmcs
rdkit.Chem.fmcs.fmcs'.fragmented_mol_to_enumeration_mols
rdkit.Chem.fmcs.fmcs'.gen_primes
rdkit.Chem.fmcs.fmcs'.generate_smarts
rdkit.Chem.fmcs.fmcs'.get_canonical_bondtype_counts
rdkit.Chem.fmcs.fmcs'.get_canonical_bondtypes
rdkit.Chem.fmcs.fmcs'.get_closure_label
rdkit.Chem.fmcs.fmcs'.get_counts
rdkit.Chem.fmcs.fmcs'.get_initial_cangen_nodes
rdkit.Chem.fmcs.fmcs'.get_isotopes
rdkit.Chem.fmcs.fmcs'.get_selected_atom_classes
rdkit.Chem.fmcs.fmcs'.get_specified_types
rdkit.Chem.fmcs.fmcs'.get_typed_fragment
rdkit.Chem.fmcs.fmcs'.get_typed_molecule
rdkit.Chem.fmcs.fmcs'.intersect_counts
rdkit.Chem.fmcs.fmcs'.main
rdkit.Chem.fmcs.fmcs'.make_arbitrary_smarts
rdkit.Chem.fmcs.fmcs'.make_canonical_smarts
rdkit.Chem.fmcs.fmcs'.make_complete_sdf
rdkit.Chem.fmcs.fmcs'.make_fragment_sdf
rdkit.Chem.fmcs.fmcs'.make_fragment_smiles
rdkit.Chem.fmcs.fmcs'.make_structure_format
rdkit.Chem.fmcs.fmcs'.nonempty_powerset
rdkit.Chem.fmcs.fmcs'.parse_num_atoms
rdkit.Chem.fmcs.fmcs'.parse_select
rdkit.Chem.fmcs.fmcs'.parse_threshold
rdkit.Chem.fmcs.fmcs'.parse_timeout
rdkit.Chem.fmcs.fmcs'.powerset
rdkit.Chem.fmcs.fmcs'.prune_maximize_atoms
rdkit.Chem.fmcs.fmcs'.prune_maximize_bonds
rdkit.Chem.fmcs.fmcs'.remove_unknown_bondtypes
rdkit.Chem.fmcs.fmcs'.rerank
rdkit.Chem.fmcs.fmcs'.restore_isotopes
rdkit.Chem.fmcs.fmcs'.save_atom_classes
rdkit.Chem.fmcs.fmcs'.save_isotopes
rdkit.Chem.fmcs.fmcs'.set_isotopes
rdkit.Chem.fmcs.fmcs'.subgraph_to_fragment
rdkit.Chem.fmcs.fmcs'.tiebreaker
rdkit.Chem.inchi.InchiToInchiKey
rdkit.Chem.inchi.MolFromInchi
rdkit.Chem.inchi.MolToInchi
rdkit.Chem.inchi.MolToInchiAndAuxInfo
rdkit.Chem.rdChemReactions.Compute2DCoordsForReaction
rdkit.Chem.rdChemReactions.CreateDifferenceFingerprintForReaction
rdkit.Chem.rdChemReactions.CreateStructuralFingerprintForReaction
rdkit.Chem.rdChemReactions.EnumerateLibraryCanSerialize
rdkit.Chem.rdChemReactions.GetChemDrawRxnAdjustParams
rdkit.Chem.rdChemReactions.GetDefaultAdjustParams
rdkit.Chem.rdChemReactions.HasAgentTemplateSubstructMatch
rdkit.Chem.rdChemReactions.HasProductTemplateSubstructMatch
rdkit.Chem.rdChemReactions.HasReactantTemplateSubstructMatch
rdkit.Chem.rdChemReactions.HasReactionAtomMapping
rdkit.Chem.rdChemReactions.HasReactionSubstructMatch
rdkit.Chem.rdChemReactions.IsReactionTemplateMoleculeAgent
rdkit.Chem.rdChemReactions.MatchOnlyAtRgroupsAdjustParams
rdkit.Chem.rdChemReactions.PreprocessReaction
rdkit.Chem.rdChemReactions.ReactionFromMolecule
rdkit.Chem.rdChemReactions.ReactionFromRxnBlock
rdkit.Chem.rdChemReactions.ReactionFromRxnFile
rdkit.Chem.rdChemReactions.ReactionFromSmarts
rdkit.Chem.rdChemReactions.ReactionToMolecule
rdkit.Chem.rdChemReactions.ReactionToRxnBlock
rdkit.Chem.rdChemReactions.ReactionToSmarts
rdkit.Chem.rdChemReactions.ReactionToSmiles
rdkit.Chem.rdChemReactions.ReduceProductToSideChains
rdkit.Chem.rdChemReactions.RemoveMappingNumbersFromReactions
rdkit.Chem.rdChemReactions.SanitizeRxn
rdkit.Chem.rdChemReactions.UpdateProductsStereochemistry
rdkit.Chem.rdDepictor.Compute2DCoords
rdkit.Chem.rdDepictor.Compute2DCoordsMimicDistmat
rdkit.Chem.rdDepictor.GenerateDepictionMatching2DStructure
rdkit.Chem.rdDepictor.GenerateDepictionMatching3DStructure
rdkit.Chem.rdDistGeom.ETDG
rdkit.Chem.rdDistGeom.ETKDG
rdkit.Chem.rdDistGeom.EmbedMolecule
rdkit.Chem.rdDistGeom.EmbedMultipleConfs
rdkit.Chem.rdDistGeom.GetMoleculeBoundsMatrix
rdkit.Chem.rdDistGeom.KDG
rdkit.Chem.rdFMCS.FindMCS
rdkit.Chem.rdForceFieldHelpers.GetUFFAngleBendParams
rdkit.Chem.rdForceFieldHelpers.GetUFFBondStretchParams
rdkit.Chem.rdForceFieldHelpers.GetUFFInversionParams
rdkit.Chem.rdForceFieldHelpers.GetUFFTorsionParams
rdkit.Chem.rdForceFieldHelpers.GetUFFVdWParams
rdkit.Chem.rdForceFieldHelpers.MMFFGetMoleculeForceField
rdkit.Chem.rdForceFieldHelpers.MMFFGetMoleculeProperties
rdkit.Chem.rdForceFieldHelpers.MMFFHasAllMoleculeParams
rdkit.Chem.rdForceFieldHelpers.MMFFOptimizeMolecule
rdkit.Chem.rdForceFieldHelpers.MMFFOptimizeMoleculeConfs
rdkit.Chem.rdForceFieldHelpers.MMFFSanitizeMolecule
rdkit.Chem.rdForceFieldHelpers.UFFGetMoleculeForceField
rdkit.Chem.rdForceFieldHelpers.UFFHasAllMoleculeParams
rdkit.Chem.rdForceFieldHelpers.UFFOptimizeMolecule
rdkit.Chem.rdForceFieldHelpers.UFFOptimizeMoleculeConfs
rdkit.Chem.rdMMPA.FragmentMol
rdkit.Chem.rdMolAlign.AlignMol
rdkit.Chem.rdMolAlign.AlignMolConformers
rdkit.Chem.rdMolAlign.GetAlignmentTransform
rdkit.Chem.rdMolAlign.GetBestRMS
rdkit.Chem.rdMolAlign.GetCrippenO3A
rdkit.Chem.rdMolAlign.GetCrippenO3AForProbeConfs
rdkit.Chem.rdMolAlign.GetO3A
rdkit.Chem.rdMolAlign.GetO3AForProbeConfs
rdkit.Chem.rdMolAlign.RandomTransform
rdkit.Chem.rdMolCatalog.CreateMolCatalog
rdkit.Chem.rdMolChemicalFeatures.BuildFeatureFactory
rdkit.Chem.rdMolChemicalFeatures.BuildFeatureFactoryFromString
rdkit.Chem.rdMolChemicalFeatures.GetAtomMatch
rdkit.Chem.rdMolDescriptors.CalcAUTOCORR2D
rdkit.Chem.rdMolDescriptors.CalcAUTOCORR3D
rdkit.Chem.rdMolDescriptors.CalcAsphericity
rdkit.Chem.rdMolDescriptors.CalcChi0n
rdkit.Chem.rdMolDescriptors.CalcChi0v
rdkit.Chem.rdMolDescriptors.CalcChi1n
rdkit.Chem.rdMolDescriptors.CalcChi1v
rdkit.Chem.rdMolDescriptors.CalcChi2n
rdkit.Chem.rdMolDescriptors.CalcChi2v
rdkit.Chem.rdMolDescriptors.CalcChi3n
rdkit.Chem.rdMolDescriptors.CalcChi3v
rdkit.Chem.rdMolDescriptors.CalcChi4n
rdkit.Chem.rdMolDescriptors.CalcChi4v
rdkit.Chem.rdMolDescriptors.CalcChiNn
rdkit.Chem.rdMolDescriptors.CalcChiNv
rdkit.Chem.rdMolDescriptors.CalcCrippenDescriptors
rdkit.Chem.rdMolDescriptors.CalcEccentricity
rdkit.Chem.rdMolDescriptors.CalcExactMolWt
rdkit.Chem.rdMolDescriptors.CalcFractionCSP3
rdkit.Chem.rdMolDescriptors.CalcGETAWAY
rdkit.Chem.rdMolDescriptors.CalcHallKierAlpha
rdkit.Chem.rdMolDescriptors.CalcInertialShapeFactor
rdkit.Chem.rdMolDescriptors.CalcKappa1
rdkit.Chem.rdMolDescriptors.CalcKappa2
rdkit.Chem.rdMolDescriptors.CalcKappa3
rdkit.Chem.rdMolDescriptors.CalcLabuteASA
rdkit.Chem.rdMolDescriptors.CalcMORSE
rdkit.Chem.rdMolDescriptors.CalcMolFormula
rdkit.Chem.rdMolDescriptors.CalcNPR1
rdkit.Chem.rdMolDescriptors.CalcNPR2
rdkit.Chem.rdMolDescriptors.CalcNumAliphaticCarbocycles
rdkit.Chem.rdMolDescriptors.CalcNumAliphaticHeterocycles
rdkit.Chem.rdMolDescriptors.CalcNumAliphaticRings
rdkit.Chem.rdMolDescriptors.CalcNumAmideBonds
rdkit.Chem.rdMolDescriptors.CalcNumAromaticCarbocycles
rdkit.Chem.rdMolDescriptors.CalcNumAromaticHeterocycles
rdkit.Chem.rdMolDescriptors.CalcNumAromaticRings
rdkit.Chem.rdMolDescriptors.CalcNumAtomStereoCenters
rdkit.Chem.rdMolDescriptors.CalcNumBridgeheadAtoms
rdkit.Chem.rdMolDescriptors.CalcNumHBA
rdkit.Chem.rdMolDescriptors.CalcNumHBD
rdkit.Chem.rdMolDescriptors.CalcNumHeteroatoms
rdkit.Chem.rdMolDescriptors.CalcNumHeterocycles
rdkit.Chem.rdMolDescriptors.CalcNumLipinskiHBA
rdkit.Chem.rdMolDescriptors.CalcNumLipinskiHBD
rdkit.Chem.rdMolDescriptors.CalcNumRings
rdkit.Chem.rdMolDescriptors.CalcNumRotatableBonds
rdkit.Chem.rdMolDescriptors.CalcNumSaturatedCarbocycles
rdkit.Chem.rdMolDescriptors.CalcNumSaturatedHeterocycles
rdkit.Chem.rdMolDescriptors.CalcNumSaturatedRings
rdkit.Chem.rdMolDescriptors.CalcNumSpiroAtoms
rdkit.Chem.rdMolDescriptors.CalcNumUnspecifiedAtomStereoCenters
rdkit.Chem.rdMolDescriptors.CalcPBF
rdkit.Chem.rdMolDescriptors.CalcPMI1
rdkit.Chem.rdMolDescriptors.CalcPMI2
rdkit.Chem.rdMolDescriptors.CalcPMI3
rdkit.Chem.rdMolDescriptors.CalcRDF
rdkit.Chem.rdMolDescriptors.CalcRadiusOfGyration
rdkit.Chem.rdMolDescriptors.CalcSpherocityIndex
rdkit.Chem.rdMolDescriptors.CalcTPSA
rdkit.Chem.rdMolDescriptors.CalcWHIM
rdkit.Chem.rdMolDescriptors.GetAtomPairAtomCode
rdkit.Chem.rdMolDescriptors.GetAtomPairCode
rdkit.Chem.rdMolDescriptors.GetAtomPairFingerprint
rdkit.Chem.rdMolDescriptors.GetConnectivityInvariants
rdkit.Chem.rdMolDescriptors.GetFeatureInvariants
rdkit.Chem.rdMolDescriptors.GetHashedAtomPairFingerprint
rdkit.Chem.rdMolDescriptors.GetHashedAtomPairFingerprintAsBitVect
rdkit.Chem.rdMolDescriptors.GetHashedMorganFingerprint
rdkit.Chem.rdMolDescriptors.GetHashedTopologicalTorsionFingerprint
rdkit.Chem.rdMolDescriptors.GetHashedTopologicalTorsionFingerprintAsBitVect
rdkit.Chem.rdMolDescriptors.GetMACCSKeysFingerprint
rdkit.Chem.rdMolDescriptors.GetMorganFingerprint
rdkit.Chem.rdMolDescriptors.GetMorganFingerprintAsBitVect
rdkit.Chem.rdMolDescriptors.GetTopologicalTorsionFingerprint
rdkit.Chem.rdMolDescriptors.GetUSR
rdkit.Chem.rdMolDescriptors.GetUSRCAT
rdkit.Chem.rdMolDescriptors.GetUSRDistributions
rdkit.Chem.rdMolDescriptors.GetUSRDistributionsFromPoints
rdkit.Chem.rdMolDescriptors.GetUSRFromDistributions
rdkit.Chem.rdMolDescriptors.GetUSRScore
rdkit.Chem.rdMolDescriptors.MQNs_
rdkit.Chem.rdMolDescriptors.MakePropertyRangeQuery
rdkit.Chem.rdMolDescriptors.PEOE_VSA_
rdkit.Chem.rdMolDescriptors.SMR_VSA_
rdkit.Chem.rdMolDescriptors.SlogP_VSA_
rdkit.Chem.rdMolDescriptors._CalcCrippenContribs
rdkit.Chem.rdMolDescriptors._CalcLabuteASAContribs
rdkit.Chem.rdMolDescriptors._CalcMolWt
rdkit.Chem.rdMolDescriptors._CalcTPSAContribs
rdkit.Chem.rdMolHash.GenerateMoleculeHashString
rdkit.Chem.rdMolTransforms.CanonicalizeConformer
rdkit.Chem.rdMolTransforms.CanonicalizeMol
rdkit.Chem.rdMolTransforms.ComputeCanonicalTransform
rdkit.Chem.rdMolTransforms.ComputeCentroid
rdkit.Chem.rdMolTransforms.GetAngleDeg
rdkit.Chem.rdMolTransforms.GetAngleRad
rdkit.Chem.rdMolTransforms.GetBondLength
rdkit.Chem.rdMolTransforms.GetDihedralDeg
rdkit.Chem.rdMolTransforms.GetDihedralRad
rdkit.Chem.rdMolTransforms.SetAngleDeg
rdkit.Chem.rdMolTransforms.SetAngleRad
rdkit.Chem.rdMolTransforms.SetBondLength
rdkit.Chem.rdMolTransforms.SetDihedralDeg
rdkit.Chem.rdMolTransforms.SetDihedralRad
rdkit.Chem.rdMolTransforms.TransformConformer
rdkit.Chem.rdPartialCharges.ComputeGasteigerCharges
rdkit.Chem.rdRGroupDecomposition.RGroupDecompose
rdkit.Chem.rdReducedGraphs.GenerateErGFingerprintForReducedGraph
rdkit.Chem.rdReducedGraphs.GenerateMolExtendedReducedGraph
rdkit.Chem.rdReducedGraphs.GetErGFingerprint
rdkit.Chem.rdSLNParse.MolFromQuerySLN
rdkit.Chem.rdSLNParse.MolFromSLN
rdkit.Chem.rdShapeHelpers.ComputeConfBox
rdkit.Chem.rdShapeHelpers.ComputeConfDimsAndOffset
rdkit.Chem.rdShapeHelpers.ComputeUnionBox
rdkit.Chem.rdShapeHelpers.EncodeShape
rdkit.Chem.rdShapeHelpers.ShapeProtrudeDist
rdkit.Chem.rdShapeHelpers.ShapeTanimotoDist
rdkit.Chem.rdchem.GetAtomAlias
rdkit.Chem.rdchem.GetAtomRLabel
rdkit.Chem.rdchem.GetAtomValue
rdkit.Chem.rdchem.GetDefaultPickleProperties
rdkit.Chem.rdchem.GetPeriodicTable
rdkit.Chem.rdchem.GetSupplementalSmilesLabel
rdkit.Chem.rdchem.LogErrorMsg
rdkit.Chem.rdchem.LogWarningMsg
rdkit.Chem.rdchem.SetAtomAlias
rdkit.Chem.rdchem.SetAtomRLabel
rdkit.Chem.rdchem.SetAtomValue
rdkit.Chem.rdchem.SetDefaultPickleProperties
rdkit.Chem.rdchem.SetSupplementalSmilesLabel
rdkit.Chem.rdchem.WrapLogs
rdkit.Chem.rdchem._HasSubstructMatchStr
rdkit.Chem.rdchem.tossit
rdkit.Chem.rdfiltercatalog.FilterCatalogCanSerialize
rdkit.Chem.rdfiltercatalog.GetFlattenedFunctionalGroupHierarchy
rdkit.Chem.rdfiltercatalog.GetFunctionalGroupHierarchy
rdkit.Chem.rdinchi.InchiToInchiKey
rdkit.Chem.rdinchi.InchiToMol
rdkit.Chem.rdinchi.MolToInchi
rdkit.Chem.rdmolfiles.CanonicalRankAtoms
rdkit.Chem.rdmolfiles.CanonicalRankAtomsInFragment
rdkit.Chem.rdmolfiles.MolFragmentToSmiles
rdkit.Chem.rdmolfiles.MolFromFASTA
rdkit.Chem.rdmolfiles.MolFromHELM
rdkit.Chem.rdmolfiles.MolFromMol2Block
rdkit.Chem.rdmolfiles.MolFromMol2File
rdkit.Chem.rdmolfiles.MolFromMolBlock
rdkit.Chem.rdmolfiles.MolFromMolFile
rdkit.Chem.rdmolfiles.MolFromPDBBlock
rdkit.Chem.rdmolfiles.MolFromPDBFile
rdkit.Chem.rdmolfiles.MolFromSequence
rdkit.Chem.rdmolfiles.MolFromSmarts
rdkit.Chem.rdmolfiles.MolFromSmiles
rdkit.Chem.rdmolfiles.MolFromTPLBlock
rdkit.Chem.rdmolfiles.MolFromTPLFile
rdkit.Chem.rdmolfiles.MolToFASTA
rdkit.Chem.rdmolfiles.MolToHELM
rdkit.Chem.rdmolfiles.MolToMolBlock
rdkit.Chem.rdmolfiles.MolToMolFile
rdkit.Chem.rdmolfiles.MolToPDBBlock
rdkit.Chem.rdmolfiles.MolToPDBFile
rdkit.Chem.rdmolfiles.MolToSequence
rdkit.Chem.rdmolfiles.MolToSmarts
rdkit.Chem.rdmolfiles.MolToSmiles
rdkit.Chem.rdmolfiles.MolToTPLBlock
rdkit.Chem.rdmolfiles.MolToTPLFile
rdkit.Chem.rdmolfiles.SmilesMolSupplierFromText
rdkit.Chem.rdmolops.AddHs
rdkit.Chem.rdmolops.AddRecursiveQuery
rdkit.Chem.rdmolops.AdjustQueryProperties
rdkit.Chem.rdmolops.AssignAtomChiralTagsFromStructure
rdkit.Chem.rdmolops.AssignRadicals
rdkit.Chem.rdmolops.AssignStereochemistry
rdkit.Chem.rdmolops.Cleanup
rdkit.Chem.rdmolops.CombineMols
rdkit.Chem.rdmolops.DeleteSubstructs
rdkit.Chem.rdmolops.DetectBondStereoChemistry
rdkit.Chem.rdmolops.DetectBondStereochemistry
rdkit.Chem.rdmolops.FastFindRings
rdkit.Chem.rdmolops.FindAllPathsOfLengthN
rdkit.Chem.rdmolops.FindAllSubgraphsOfLengthMToN
rdkit.Chem.rdmolops.FindAllSubgraphsOfLengthN
rdkit.Chem.rdmolops.FindAtomEnvironmentOfRadiusN
rdkit.Chem.rdmolops.FindPotentialStereoBonds
rdkit.Chem.rdmolops.FindUniqueSubgraphsOfLengthN
rdkit.Chem.rdmolops.FragmentOnBRICSBonds
rdkit.Chem.rdmolops.FragmentOnBonds
rdkit.Chem.rdmolops.FragmentOnSomeBonds
rdkit.Chem.rdmolops.Get3DDistanceMatrix
rdkit.Chem.rdmolops.GetAdjacencyMatrix
rdkit.Chem.rdmolops.GetDistanceMatrix
rdkit.Chem.rdmolops.GetFormalCharge
rdkit.Chem.rdmolops.GetMolFrags
rdkit.Chem.rdmolops.GetSSSR
rdkit.Chem.rdmolops.GetShortestPath
rdkit.Chem.rdmolops.GetSymmSSSR
rdkit.Chem.rdmolops.Kekulize
rdkit.Chem.rdmolops.LayeredFingerprint
rdkit.Chem.rdmolops.MergeQueryHs
rdkit.Chem.rdmolops.MolAddRecursiveQueries
rdkit.Chem.rdmolops.MolToSVG
rdkit.Chem.rdmolops.MurckoDecompose
rdkit.Chem.rdmolops.ParseMolQueryDefFile
rdkit.Chem.rdmolops.PathToSubmol
rdkit.Chem.rdmolops.PatternFingerprint
rdkit.Chem.rdmolops.RDKFingerprint
rdkit.Chem.rdmolops.RemoveHs
rdkit.Chem.rdmolops.RemoveStereochemistry
rdkit.Chem.rdmolops.RenumberAtoms
rdkit.Chem.rdmolops.ReplaceCore
rdkit.Chem.rdmolops.ReplaceSidechains
rdkit.Chem.rdmolops.ReplaceSubstructs
rdkit.Chem.rdmolops.SanitizeMol
rdkit.Chem.rdmolops.SetAromaticity
rdkit.Chem.rdmolops.SetConjugation
rdkit.Chem.rdmolops.SetHybridization
rdkit.Chem.rdmolops.SplitMolByPDBChainId
rdkit.Chem.rdmolops.SplitMolByPDBResidues
rdkit.Chem.rdmolops.UnfoldedRDKFingerprintCountBased
rdkit.Chem.rdmolops.WedgeMolBonds
rdkit.Chem.rdqueries.AtomNumEqualsQueryAtom
rdkit.Chem.rdqueries.AtomNumGreaterQueryAtom
rdkit.Chem.rdqueries.AtomNumLessQueryAtom
rdkit.Chem.rdqueries.ExplicitDegreeEqualsQueryAtom
rdkit.Chem.rdqueries.ExplicitDegreeGreaterQueryAtom
rdkit.Chem.rdqueries.ExplicitDegreeLessQueryAtom
rdkit.Chem.rdqueries.ExplicitValenceEqualsQueryAtom
rdkit.Chem.rdqueries.ExplicitValenceGreaterQueryAtom
rdkit.Chem.rdqueries.ExplicitValenceLessQueryAtom
rdkit.Chem.rdqueries.FormalChargeEqualsQueryAtom
rdkit.Chem.rdqueries.FormalChargeGreaterQueryAtom
rdkit.Chem.rdqueries.FormalChargeLessQueryAtom
rdkit.Chem.rdqueries.HCountEqualsQueryAtom
rdkit.Chem.rdqueries.HCountGreaterQueryAtom
rdkit.Chem.rdqueries.HCountLessQueryAtom
rdkit.Chem.rdqueries.HasBoolPropWithValueQueryAtom
rdkit.Chem.rdqueries.HasBoolPropWithValueQueryBond
rdkit.Chem.rdqueries.HasChiralTagQueryAtom
rdkit.Chem.rdqueries.HasDoublePropWithValueQueryAtom
rdkit.Chem.rdqueries.HasDoublePropWithValueQueryBond
rdkit.Chem.rdqueries.HasIntPropWithValueQueryAtom
rdkit.Chem.rdqueries.HasIntPropWithValueQueryBond
rdkit.Chem.rdqueries.HasPropQueryAtom
rdkit.Chem.rdqueries.HasPropQueryBond
rdkit.Chem.rdqueries.HasStringPropWithValueQueryAtom
rdkit.Chem.rdqueries.HasStringPropWithValueQueryBond
rdkit.Chem.rdqueries.HybridizationEqualsQueryAtom
rdkit.Chem.rdqueries.HybridizationGreaterQueryAtom
rdkit.Chem.rdqueries.HybridizationLessQueryAtom
rdkit.Chem.rdqueries.InNRingsEqualsQueryAtom
rdkit.Chem.rdqueries.InNRingsGreaterQueryAtom
rdkit.Chem.rdqueries.InNRingsLessQueryAtom
rdkit.Chem.rdqueries.IsAliphaticQueryAtom
rdkit.Chem.rdqueries.IsAromaticQueryAtom
rdkit.Chem.rdqueries.IsInRingQueryAtom
rdkit.Chem.rdqueries.IsUnsaturatedQueryAtom
rdkit.Chem.rdqueries.IsotopeEqualsQueryAtom
rdkit.Chem.rdqueries.IsotopeGreaterQueryAtom
rdkit.Chem.rdqueries.IsotopeLessQueryAtom
rdkit.Chem.rdqueries.MassEqualsQueryAtom
rdkit.Chem.rdqueries.MassGreaterQueryAtom
rdkit.Chem.rdqueries.MassLessQueryAtom
rdkit.Chem.rdqueries.MinRingSizeEqualsQueryAtom
rdkit.Chem.rdqueries.MinRingSizeGreaterQueryAtom
rdkit.Chem.rdqueries.MinRingSizeLessQueryAtom
rdkit.Chem.rdqueries.MissingChiralTagQueryAtom
rdkit.Chem.rdqueries.NumRadicalElectronsEqualsQueryAtom
rdkit.Chem.rdqueries.NumRadicalElectronsGreaterQueryAtom
rdkit.Chem.rdqueries.NumRadicalElectronsLessQueryAtom
rdkit.Chem.rdqueries.RingBondCountEqualsQueryAtom
rdkit.Chem.rdqueries.RingBondCountGreaterQueryAtom
rdkit.Chem.rdqueries.RingBondCountLessQueryAtom
rdkit.Chem.rdqueries.TotalDegreeEqualsQueryAtom
rdkit.Chem.rdqueries.TotalDegreeGreaterQueryAtom
rdkit.Chem.rdqueries.TotalDegreeLessQueryAtom
rdkit.Chem.rdqueries.TotalValenceEqualsQueryAtom
rdkit.Chem.rdqueries.TotalValenceGreaterQueryAtom
rdkit.Chem.rdqueries.TotalValenceLessQueryAtom
rdkit.Chem.rdtrajectory.ReadAmberTrajectory
rdkit.Chem.rdtrajectory.ReadGromosTrajectory
rdkit.Chem.rdtrajectory.Snapshot
rdkit.Chem.rdtrajectory.Trajectory
rdkit.DataManip.Metric.rdMetricMatrixCalc.GetEuclideanDistMat
rdkit.DataManip.Metric.rdMetricMatrixCalc.GetTanimotoDistMat
rdkit.DataManip.Metric.rdMetricMatrixCalc.GetTanimotoSimMat
rdkit.DataStructs.BitEnsembleDb._InitScoreTable
rdkit.DataStructs.BitEnsembleDb._ScoreToDb
rdkit.DataStructs.BitUtils.ConstructEnsembleBV
rdkit.DataStructs.BitUtils._runDoctests
rdkit.DataStructs.FingerprintSimilarity
rdkit.DataStructs.FoldToTargetDensity
rdkit.DataStructs.HierarchyVis.DrawHierarchy
rdkit.DataStructs.HierarchyVis.GetMinCanvasSize
rdkit.DataStructs.LazySignature._runDoctests
rdkit.DataStructs.TopNContainer._exampleCode
rdkit.DataStructs.VectCollection._runDoctests
rdkit.DataStructs.cDataStructs.AllBitSimilarity
rdkit.DataStructs.cDataStructs.AllProbeBitsMatch
rdkit.DataStructs.cDataStructs.AsymmetricSimilarity
rdkit.DataStructs.cDataStructs.BitVectToBinaryText
rdkit.DataStructs.cDataStructs.BitVectToFPSText
rdkit.DataStructs.cDataStructs.BitVectToText
rdkit.DataStructs.cDataStructs.BraunBlanquetSimilarity
rdkit.DataStructs.cDataStructs.BulkAllBitSimilarity
rdkit.DataStructs.cDataStructs.BulkAsymmetricSimilarity
rdkit.DataStructs.cDataStructs.BulkBraunBlanquetSimilarity
rdkit.DataStructs.cDataStructs.BulkCosineSimilarity
rdkit.DataStructs.cDataStructs.BulkDiceSimilarity
rdkit.DataStructs.cDataStructs.BulkKulczynskiSimilarity
rdkit.DataStructs.cDataStructs.BulkMcConnaugheySimilarity
rdkit.DataStructs.cDataStructs.BulkOnBitSimilarity
rdkit.DataStructs.cDataStructs.BulkRogotGoldbergSimilarity
rdkit.DataStructs.cDataStructs.BulkRusselSimilarity
rdkit.DataStructs.cDataStructs.BulkSokalSimilarity
rdkit.DataStructs.cDataStructs.BulkTanimotoSimilarity
rdkit.DataStructs.cDataStructs.BulkTverskySimilarity
rdkit.DataStructs.cDataStructs.ComputeL1Norm
rdkit.DataStructs.cDataStructs.ConvertToExplicit
rdkit.DataStructs.cDataStructs.ConvertToNumpyArray
rdkit.DataStructs.cDataStructs.CosineSimilarity
rdkit.DataStructs.cDataStructs.CreateFromBinaryText
rdkit.DataStructs.cDataStructs.CreateFromBitString
rdkit.DataStructs.cDataStructs.CreateFromFPSText
rdkit.DataStructs.cDataStructs.DiceSimilarity
rdkit.DataStructs.cDataStructs.FoldFingerprint
rdkit.DataStructs.cDataStructs.InitFromDaylightString
rdkit.DataStructs.cDataStructs.KulczynskiSimilarity
rdkit.DataStructs.cDataStructs.McConnaugheySimilarity
rdkit.DataStructs.cDataStructs.NumBitsInCommon
rdkit.DataStructs.cDataStructs.OffBitProjSimilarity
rdkit.DataStructs.cDataStructs.OffBitsInCommon
rdkit.DataStructs.cDataStructs.OnBitProjSimilarity
rdkit.DataStructs.cDataStructs.OnBitSimilarity
rdkit.DataStructs.cDataStructs.OnBitsInCommon
rdkit.DataStructs.cDataStructs.RogotGoldbergSimilarity
rdkit.DataStructs.cDataStructs.RusselSimilarity
rdkit.DataStructs.cDataStructs.SokalSimilarity
rdkit.DataStructs.cDataStructs.TanimotoSimilarity
rdkit.DataStructs.cDataStructs.TverskySimilarity
rdkit.Dbase.DbInfo.GetColumnInfoFromCursor
rdkit.Dbase.DbInfo.GetColumnNames
rdkit.Dbase.DbInfo.GetColumnNamesAndTypes
rdkit.Dbase.DbInfo.GetDbNames
rdkit.Dbase.DbInfo.GetTableNames
rdkit.Dbase.DbModule.connect
rdkit.Dbase.DbUtils.DatabaseToDatabase
rdkit.Dbase.DbUtils.DatabaseToText
rdkit.Dbase.DbUtils.GetColumns
rdkit.Dbase.DbUtils.GetData
rdkit.Dbase.DbUtils.GetTypeStrings
rdkit.Dbase.DbUtils.TextFileToDatabase
rdkit.Dbase.DbUtils.TypeFinder
rdkit.Dbase.DbUtils._AddDataToDb
rdkit.Dbase.DbUtils._AdjustColHeadings
rdkit.Dbase.DbUtils._insertBlock
rdkit.Dbase.DbUtils._take
rdkit.Dbase.StorageUtils.GetNextId
rdkit.Dbase.StorageUtils.GetNextRDId
rdkit.Dbase.StorageUtils.IndexToRDId
rdkit.Dbase.StorageUtils.RDIdToInt
rdkit.Dbase.StorageUtils.RegisterItem
rdkit.Dbase.StorageUtils.RegisterItems
rdkit.Dbase.StorageUtils.ValidateRDId
rdkit.Dbase.StorageUtils._test
rdkit.DistanceGeometry.DistGeom.DoTriangleSmoothing
rdkit.DistanceGeometry.DistGeom.EmbedBoundsMatrix
rdkit.Geometry.rdGeometry.ComputeDihedralAngle
rdkit.Geometry.rdGeometry.ComputeGridCentroid
rdkit.Geometry.rdGeometry.ComputeSignedDihedralAngle
rdkit.Geometry.rdGeometry.FindGridTerminalPoints
rdkit.Geometry.rdGeometry.ProtrudeDistance
rdkit.Geometry.rdGeometry.TanimotoDistance
rdkit.Geometry.rdGeometry.UniformGrid3D
rdkit.Geometry.rdGeometry.WriteGridToFile
rdkit.ML.AnalyzeComposite.ErrorStats
rdkit.ML.AnalyzeComposite.ProcessIt
rdkit.ML.AnalyzeComposite.ShowStats
rdkit.ML.AnalyzeComposite.Usage
rdkit.ML.BuildComposite.GetCommandLine
rdkit.ML.BuildComposite.ParseArgs
rdkit.ML.BuildComposite.RunIt
rdkit.ML.BuildComposite.RunOnData
rdkit.ML.BuildComposite.SetDefaults
rdkit.ML.BuildComposite.ShowVersion
rdkit.ML.BuildComposite.Usage
rdkit.ML.BuildComposite.message
rdkit.ML.BuildComposite.testall
rdkit.ML.Cluster.Butina.ClusterData
rdkit.ML.Cluster.Butina.EuclideanDist
rdkit.ML.Cluster.ClusterUtils.FindClusterCentroidFromDists
rdkit.ML.Cluster.ClusterUtils.GetNodeList
rdkit.ML.Cluster.ClusterUtils.GetNodesDownToCentroids
rdkit.ML.Cluster.ClusterUtils.SplitIntoNClusters
rdkit.ML.Cluster.ClusterUtils._BreadthFirstSplit
rdkit.ML.Cluster.ClusterUtils._HeightFirstSplit
rdkit.ML.Cluster.ClusterVis.ClusterToImg
rdkit.ML.Cluster.ClusterVis.ClusterToPDF
rdkit.ML.Cluster.ClusterVis.ClusterToSVG
rdkit.ML.Cluster.ClusterVis.DrawClusterTree
rdkit.ML.Cluster.ClusterVis._DrawClusterTree
rdkit.ML.Cluster.ClusterVis._scaleMetric
rdkit.ML.Cluster.Clustering.MurtaghCluster
rdkit.ML.Cluster.Clustering.MurtaghDistCluster
rdkit.ML.Cluster.Murtagh.ClusterData
rdkit.ML.Cluster.Murtagh._LookupDist
rdkit.ML.Cluster.Murtagh._ToClusters
rdkit.ML.Cluster.Resemblance.CalcMetricMatrix
rdkit.ML.Cluster.Resemblance.EuclideanDistance
rdkit.ML.Cluster.Resemblance.FindMinValInList
rdkit.ML.Cluster.Resemblance.ShowMetricMat
rdkit.ML.Cluster.Standardize.StdDev
rdkit.ML.Composite.AdjustComposite.BalanceComposite
rdkit.ML.Composite.BayesComposite.BayesCompositeToComposite
rdkit.ML.Composite.BayesComposite.CompositeToBayesComposite
rdkit.ML.CompositeRun.SetDefaults
rdkit.ML.Data.DataUtils.BuildDataSet
rdkit.ML.Data.DataUtils.BuildQuantDataSet
rdkit.ML.Data.DataUtils.CalcNPossibleUsingMap
rdkit.ML.Data.DataUtils.CountResults
rdkit.ML.Data.DataUtils.DBToData
rdkit.ML.Data.DataUtils.FilterData
rdkit.ML.Data.DataUtils.InitRandomNumbers
rdkit.ML.Data.DataUtils.RandomizeActivities
rdkit.ML.Data.DataUtils.ReadGeneralExamples
rdkit.ML.Data.DataUtils.ReadQuantExamples
rdkit.ML.Data.DataUtils.ReadVars
rdkit.ML.Data.DataUtils.TakeEnsemble
rdkit.ML.Data.DataUtils.TextFileToData
rdkit.ML.Data.DataUtils.TextToData
rdkit.ML.Data.DataUtils.WriteData
rdkit.ML.Data.DataUtils.WritePickledData
rdkit.ML.Data.DataUtils._runDoctests
rdkit.ML.Data.DataUtils.permutation
rdkit.ML.Data.FindQuantBounds.Usage
rdkit.ML.Data.FindQuantBounds.runIt
rdkit.ML.Data.Quantize.FindVarMultQuantBounds
rdkit.ML.Data.Quantize.FindVarQuantBound
rdkit.ML.Data.Quantize._GenVarTable
rdkit.ML.Data.Quantize._NewPyFindStartPoints
rdkit.ML.Data.Quantize._NewPyRecurseOnBounds
rdkit.ML.Data.Quantize._NewPyRecurseOnBounds
rdkit.ML.Data.Quantize._PyRecurseOnBounds
rdkit.ML.Data.Quantize.feq
rdkit.ML.Data.SplitData.SplitDataSet
rdkit.ML.Data.SplitData.SplitDbData
rdkit.ML.Data.SplitData.SplitIndices
rdkit.ML.Data.SplitData._runDoctests
rdkit.ML.Data.Stats.FormCorrelationMatrix
rdkit.ML.Data.Stats.FormCovarianceMatrix
rdkit.ML.Data.Stats.GetConfidenceInterval
rdkit.ML.Data.Stats.MeanAndDev
rdkit.ML.Data.Stats.PrincipalComponents
rdkit.ML.Data.Stats.R2
rdkit.ML.Data.Stats.StandardizeMatrix
rdkit.ML.Data.Stats.TransformPoints
rdkit.ML.Data.Transforms.GetAvailTransforms
rdkit.ML.Data.Transforms._CenterTForm
rdkit.ML.Data.Transforms._NormalizeTForm
rdkit.ML.Data.Transforms._StandardTForm
rdkit.ML.Data.cQuantize._FindStartPoints
rdkit.ML.DecTree.BuildQuantTree.BuildQuantTree
rdkit.ML.DecTree.BuildQuantTree.FindBest
rdkit.ML.DecTree.BuildQuantTree.QuantTreeBoot
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree2
rdkit.ML.DecTree.BuildQuantTree.TestTree
rdkit.ML.DecTree.BuildSigTree.BuildSigTree
rdkit.ML.DecTree.BuildSigTree.SigTreeBuilder
rdkit.ML.DecTree.BuildSigTree._GenerateRandomEnsemble
rdkit.ML.DecTree.CrossValidate.ChooseOptimalRoot
rdkit.ML.DecTree.CrossValidate.CrossValidate
rdkit.ML.DecTree.CrossValidate.CrossValidationDriver
rdkit.ML.DecTree.CrossValidate.TestRun
rdkit.ML.DecTree.ID3.CalcTotalEntropy
rdkit.ML.DecTree.ID3.GenVarTable
rdkit.ML.DecTree.ID3.ID3
rdkit.ML.DecTree.ID3.ID3Boot
rdkit.ML.DecTree.PruneTree.MaxCount
rdkit.ML.DecTree.PruneTree.PruneTree
rdkit.ML.DecTree.PruneTree._GetLocalError
rdkit.ML.DecTree.PruneTree._Pruner
rdkit.ML.DecTree.PruneTree._testChain
rdkit.ML.DecTree.PruneTree._testRandom
rdkit.ML.DecTree.PruneTree._testSpecific
rdkit.ML.DecTree.Tree._exampleCode
rdkit.ML.DecTree.TreeUtils.CollectDescriptorNames
rdkit.ML.DecTree.TreeUtils.CollectLabelLevels
rdkit.ML.DecTree.TreeVis.CalcTreeNodeSizes
rdkit.ML.DecTree.TreeVis.CalcTreeWidth
rdkit.ML.DecTree.TreeVis.DrawTree
rdkit.ML.DecTree.TreeVis.DrawTreeNode
rdkit.ML.DecTree.TreeVis.ResetTree
rdkit.ML.DecTree.TreeVis.SetNodeScales
rdkit.ML.DecTree.TreeVis._ApplyNodeScales
rdkit.ML.DecTree.TreeVis._ExampleCounter
rdkit.ML.DecTree.TreeVis._simpleTest
rdkit.ML.Descriptors.CompoundDescriptors.GetAllDescriptorNames
rdkit.ML.Descriptors.CompoundDescriptors._exampleCode
rdkit.ML.Descriptors.Parser.CalcMultipleCompoundsDescriptor
rdkit.ML.Descriptors.Parser.CalcSingleCompoundDescriptor
rdkit.ML.Descriptors.Parser.DEV
rdkit.ML.Descriptors.Parser.HAS
rdkit.ML.Descriptors.Parser.MAX
rdkit.ML.Descriptors.Parser.MEAN
rdkit.ML.Descriptors.Parser.MIN
rdkit.ML.Descriptors.Parser.SUM
rdkit.ML.Descriptors.Parser._SubForAtomicVars
rdkit.ML.Descriptors.Parser._SubForCompoundDescriptors
rdkit.ML.Descriptors.Parser._SubMethodArgs
rdkit.ML.Descriptors.Parser._exampleCode
rdkit.ML.EnrichPlot.AccumulateCounts
rdkit.ML.EnrichPlot.MakePlot
rdkit.ML.EnrichPlot.ScreenModel
rdkit.ML.EnrichPlot.Usage
rdkit.ML.EnrichPlot.cmp
rdkit.ML.EnrichPlot.error
rdkit.ML.EnrichPlot.message
rdkit.ML.GrowComposite.BalanceComposite
rdkit.ML.GrowComposite.GetComposites
rdkit.ML.GrowComposite.GrowIt
rdkit.ML.GrowComposite.ParseArgs
rdkit.ML.GrowComposite.SetDefaults
rdkit.ML.GrowComposite.ShowVersion
rdkit.ML.GrowComposite.Usage
rdkit.ML.GrowComposite.message
rdkit.ML.InfoTheory.BitRank.AnalyzeSparseVects
rdkit.ML.InfoTheory.BitRank.CalcInfoGains
rdkit.ML.InfoTheory.BitRank.FormCounts
rdkit.ML.InfoTheory.BitRank.RankBits
rdkit.ML.InfoTheory.BitRank.SparseRankBits
rdkit.ML.InfoTheory.entropy.PyInfoEntropy
rdkit.ML.InfoTheory.entropy.PyInfoEntropy
rdkit.ML.InfoTheory.entropy.PyInfoGain
rdkit.ML.InfoTheory.rdInfoTheory.ChiSquare
rdkit.ML.InfoTheory.rdInfoTheory.InfoGain
rdkit.ML.KNN.CrossValidate.CrossValidate
rdkit.ML.KNN.CrossValidate.CrossValidationDriver
rdkit.ML.KNN.CrossValidate.makeClassificationModel
rdkit.ML.KNN.CrossValidate.makeRegressionModel
rdkit.ML.KNN.DistFunctions.EuclideanDist
rdkit.ML.KNN.DistFunctions.TanimotoDist
rdkit.ML.KNN.DistFunctions._runDoctests
rdkit.ML.MLUtils.VoteImg.BuildVoteImage
rdkit.ML.MLUtils.VoteImg.CollectVotes
rdkit.ML.MLUtils.VoteImg.Usage
rdkit.ML.MLUtils.VoteImg.VoteAndBuildImage
rdkit.ML.ModelPackage.PackageUtils.PackageToXml
rdkit.ML.ModelPackage.PackageUtils._ConvertModelPerformance
rdkit.ML.NaiveBayes.ClassificationModel._getBinId
rdkit.ML.NaiveBayes.CrossValidate.CrossValidate
rdkit.ML.NaiveBayes.CrossValidate.CrossValidationDriver
rdkit.ML.NaiveBayes.CrossValidate.makeNBClassificationModel
rdkit.ML.Neural.CrossValidate.CrossValidate
rdkit.ML.Neural.CrossValidate.CrossValidationDriver
rdkit.ML.SLT.Risk.BurgesRiskBound
rdkit.ML.SLT.Risk.CherkasskyRiskBound
rdkit.ML.SLT.Risk.CristianiRiskBound
rdkit.ML.SLT.Risk.log2
rdkit.ML.Scoring.Scoring.CalcAUC
rdkit.ML.Scoring.Scoring.CalcBEDROC
rdkit.ML.Scoring.Scoring.CalcEnrichment
rdkit.ML.Scoring.Scoring.CalcRIE
rdkit.ML.Scoring.Scoring.CalcROC
rdkit.ML.Scoring.Scoring._RIEHelper
rdkit.ML.ScreenComposite.CalcEnrichment
rdkit.ML.ScreenComposite.CollectResults
rdkit.ML.ScreenComposite.DetailedScreen
rdkit.ML.ScreenComposite.GetScreenImage
rdkit.ML.ScreenComposite.Go
rdkit.ML.ScreenComposite.MakePredPlot
rdkit.ML.ScreenComposite.ParseArgs
rdkit.ML.ScreenComposite.PrepareDataFromDetails
rdkit.ML.ScreenComposite.ScreenFromDetails
rdkit.ML.ScreenComposite.ScreenIt
rdkit.ML.ScreenComposite.ScreenToHtml
rdkit.ML.ScreenComposite.SetDefaults
rdkit.ML.ScreenComposite.ShowVersion
rdkit.ML.ScreenComposite.ShowVoteResults
rdkit.ML.ScreenComposite.Usage
rdkit.ML.ScreenComposite._processVoteList
rdkit.ML.ScreenComposite.error
rdkit.ML.ScreenComposite.message
rdkit.ML.files.ReadDataFile
rdkit.Numerics.rdAlignment.GetAlignmentTransform
rdkit.SimDivFilters.SimilarityPickers._runDoctests
rdkit.VLib.Filter._runDoctests
rdkit.VLib.Node._runDoctests
rdkit.VLib.NodeLib.DbMolSupply.GetNode
rdkit.VLib.NodeLib.DbMolSupply._test
rdkit.VLib.NodeLib.DbPickleSupplier.GetNode
rdkit.VLib.NodeLib.DbPickleSupplier._test
rdkit.VLib.NodeLib.SDSupply._runDoctests
rdkit.VLib.NodeLib.SmartsMolFilter._runDoctests
rdkit.VLib.NodeLib.SmartsRemover._runDoctests
rdkit.VLib.NodeLib.SmilesDupeFilter._runDoctests
rdkit.VLib.NodeLib.SmilesOutput._runDoctests
rdkit.VLib.NodeLib.SmilesSupply._runDoctests
rdkit.VLib.Output._runDoctests
rdkit.VLib.Supply._runDoctests
rdkit.VLib.Transform._runDoctests
rdkit.rdBase'.AttachFileToLog
rdkit.rdBase'.DisableLog
rdkit.rdBase'.EnableLog
rdkit.rdBase'.LogMessage
rdkit.rdBase'._version

All Variables

RDConfig.RDBaseDir
RDConfig.RDBinDir
RDConfig.RDCodeDir
RDConfig.RDContribDir
RDConfig.RDDataDatabase
RDConfig.RDDataDir
RDConfig.RDDemoDir
RDConfig.RDDocsDir
RDConfig.RDProjDir
RDConfig.RDTestDatabase
RDConfig.__package__
RDConfig.defaultDBPassword
RDConfig.defaultDBUser
RDConfig.molViewer
RDConfig.pythonExe
RDConfig.pythonTestCommand
RDConfig.rpcTestPort
RDConfig.usePgSQL
RDConfig.useSqlLite
RDRandom.__package__
rdkit.Avalon.__package__
rdkit.Avalon.pyAvalonTools.__package__
rdkit.Avalon.pyAvalonTools.avalonSSSBits
rdkit.Avalon.pyAvalonTools.avalonSimilarityBits
rdkit.Chem.ADJUST_IGNOREALL
rdkit.Chem.ADJUST_IGNORECHAINS
rdkit.Chem.ADJUST_IGNOREDUMMIES
rdkit.Chem.ADJUST_IGNORENONDUMMIES
rdkit.Chem.ADJUST_IGNORENONE
rdkit.Chem.ADJUST_IGNORERINGS
rdkit.Chem.ALLOW_CHARGE_SEPARATION
rdkit.Chem.ALLOW_INCOMPLETE_OCTETS
rdkit.Chem.AROMATICITY_CUSTOM
rdkit.Chem.AROMATICITY_DEFAULT
rdkit.Chem.AROMATICITY_RDKIT
rdkit.Chem.AROMATICITY_SIMPLE
rdkit.Chem.AllChem.ADJUST_IGNOREALL
rdkit.Chem.AllChem.ADJUST_IGNORECHAINS
rdkit.Chem.AllChem.ADJUST_IGNOREDUMMIES
rdkit.Chem.AllChem.ADJUST_IGNORENONDUMMIES
rdkit.Chem.AllChem.ADJUST_IGNORENONE
rdkit.Chem.AllChem.ADJUST_IGNORERINGS
rdkit.Chem.AllChem.ALLOW_CHARGE_SEPARATION
rdkit.Chem.AllChem.ALLOW_INCOMPLETE_OCTETS
rdkit.Chem.AllChem.AROMATICITY_CUSTOM
rdkit.Chem.AllChem.AROMATICITY_DEFAULT
rdkit.Chem.AllChem.AROMATICITY_RDKIT
rdkit.Chem.AllChem.AROMATICITY_SIMPLE
rdkit.Chem.AllChem.AllProps
rdkit.Chem.AllChem.AtomProps
rdkit.Chem.AllChem.BondProps
rdkit.Chem.AllChem.CHI_OTHER
rdkit.Chem.AllChem.CHI_TETRAHEDRAL_CCW
rdkit.Chem.AllChem.CHI_TETRAHEDRAL_CW
rdkit.Chem.AllChem.CHI_UNSPECIFIED
rdkit.Chem.AllChem.COMPOSITE_AND
rdkit.Chem.AllChem.COMPOSITE_OR
rdkit.Chem.AllChem.COMPOSITE_XOR
rdkit.Chem.AllChem.ComputedProps
rdkit.Chem.AllChem.KEKULE_ALL
rdkit.Chem.AllChem.LayeredFingerprint_substructLayers
rdkit.Chem.AllChem.MolProps
rdkit.Chem.AllChem.NoProps
rdkit.Chem.AllChem.PrivateProps
rdkit.Chem.AllChem.QueryAtomData
rdkit.Chem.AllChem.SANITIZE_ADJUSTHS
rdkit.Chem.AllChem.SANITIZE_ADJUST_REACTANTS
rdkit.Chem.AllChem.SANITIZE_ALL
rdkit.Chem.AllChem.SANITIZE_ATOM_MAPS
rdkit.Chem.AllChem.SANITIZE_CLEANUP
rdkit.Chem.AllChem.SANITIZE_CLEANUPCHIRALITY
rdkit.Chem.AllChem.SANITIZE_FINDRADICALS
rdkit.Chem.AllChem.SANITIZE_KEKULIZE
rdkit.Chem.AllChem.SANITIZE_MERGEHS
rdkit.Chem.AllChem.SANITIZE_NONE
rdkit.Chem.AllChem.SANITIZE_PROPERTIES
rdkit.Chem.AllChem.SANITIZE_RGROUP_NAMES
rdkit.Chem.AllChem.SANITIZE_SETAROMATICITY
rdkit.Chem.AllChem.SANITIZE_SETCONJUGATION
rdkit.Chem.AllChem.SANITIZE_SETHYBRIDIZATION
rdkit.Chem.AllChem.SANITIZE_SYMMRINGS
rdkit.Chem.AllChem.UNCONSTRAINED_ANIONS
rdkit.Chem.AllChem.UNCONSTRAINED_CATIONS
rdkit.Chem.AllChem.__package__
rdkit.Chem.AllChem.logger
rdkit.Chem.AllProps
rdkit.Chem.AtomPairs.Pairs.__package__
rdkit.Chem.AtomPairs.Pairs._maxPathLen
rdkit.Chem.AtomPairs.Pairs.fpLen
rdkit.Chem.AtomPairs.Pairs.numFpBits
rdkit.Chem.AtomPairs.Pairs.numPathBits
rdkit.Chem.AtomPairs.Sheridan.__package__
rdkit.Chem.AtomPairs.Sheridan._maxPathLen
rdkit.Chem.AtomPairs.Sheridan._pattyDefs
rdkit.Chem.AtomPairs.Sheridan.fpLen
rdkit.Chem.AtomPairs.Sheridan.numFpBits
rdkit.Chem.AtomPairs.Sheridan.numPathBits
rdkit.Chem.AtomPairs.Sheridan.typMap
rdkit.Chem.AtomPairs.Torsions.__package__
rdkit.Chem.AtomPairs.Utils.__package__
rdkit.Chem.AtomPairs.__package__
rdkit.Chem.AtomProps
rdkit.Chem.BRICS.__package__
rdkit.Chem.BRICS.bType
rdkit.Chem.BRICS.bnd
rdkit.Chem.BRICS.bondMatchers
rdkit.Chem.BRICS.compats
rdkit.Chem.BRICS.defn
rdkit.Chem.BRICS.dummyPattern
rdkit.Chem.BRICS.e1
rdkit.Chem.BRICS.e2
rdkit.Chem.BRICS.env
rdkit.Chem.BRICS.environMatchers
rdkit.Chem.BRICS.environs
rdkit.Chem.BRICS.g1
rdkit.Chem.BRICS.g2
rdkit.Chem.BRICS.gp
rdkit.Chem.BRICS.i
rdkit.Chem.BRICS.i1
rdkit.Chem.BRICS.i2
rdkit.Chem.BRICS.j
rdkit.Chem.BRICS.labels
rdkit.Chem.BRICS.patt
rdkit.Chem.BRICS.ps
rdkit.Chem.BRICS.r1
rdkit.Chem.BRICS.r2
rdkit.Chem.BRICS.reactionDefs
rdkit.Chem.BRICS.reactions
rdkit.Chem.BRICS.reverseReactions
rdkit.Chem.BRICS.rs
rdkit.Chem.BRICS.rxn
rdkit.Chem.BRICS.rxnSet
rdkit.Chem.BRICS.sma
rdkit.Chem.BRICS.smartsGps
rdkit.Chem.BRICS.t
rdkit.Chem.BRICS.tmp
rdkit.Chem.BRICS.x
rdkit.Chem.BRICS.y
rdkit.Chem.BondProps
rdkit.Chem.BuildFragmentCatalog.__package__
rdkit.Chem.CHI_OTHER
rdkit.Chem.CHI_TETRAHEDRAL_CCW
rdkit.Chem.CHI_TETRAHEDRAL_CW
rdkit.Chem.CHI_UNSPECIFIED
rdkit.Chem.COMPOSITE_AND
rdkit.Chem.COMPOSITE_OR
rdkit.Chem.COMPOSITE_XOR
rdkit.Chem.ChemUtils.AlignDepict.__package__
rdkit.Chem.ChemUtils.BulkTester.__package__
rdkit.Chem.ChemUtils.DescriptorUtilities.__package__
rdkit.Chem.ChemUtils.SDFToCSV.__package__
rdkit.Chem.ChemUtils.TemplateExpand.__package__
rdkit.Chem.ChemUtils.TemplateExpand._greet
rdkit.Chem.ChemUtils.TemplateExpand._usage
rdkit.Chem.ChemUtils.TemplateExpand._version
rdkit.Chem.ChemUtils.TemplateExpand.logger
rdkit.Chem.ChemUtils.TemplateExpand.nDumped
rdkit.Chem.ChemUtils.__package__
rdkit.Chem.ChemicalFeatures.__package__
rdkit.Chem.ChemicalForceFields.__package__
rdkit.Chem.ComputedProps
rdkit.Chem.Crippen.__package__
rdkit.Chem.Crippen._patternOrder
rdkit.Chem.Crippen._smartsPatterns
rdkit.Chem.Crippen.defaultPatternFileName
rdkit.Chem.DSViewer._nextDisplayId
rdkit.Chem.Descriptors.__package__
rdkit.Chem.Descriptors._descList
rdkit.Chem.Descriptors.descList
rdkit.Chem.Descriptors3D.__package__
rdkit.Chem.Draw.IPythonConsole.__package__
rdkit.Chem.Draw.IPythonConsole._canUse3D
rdkit.Chem.Draw.IPythonConsole.bgcolor_3d
rdkit.Chem.Draw.IPythonConsole.drawing_type_3d
rdkit.Chem.Draw.IPythonConsole.highlightByReactant
rdkit.Chem.Draw.IPythonConsole.highlightSubstructs
rdkit.Chem.Draw.IPythonConsole.ipython_3d
rdkit.Chem.Draw.IPythonConsole.ipython_useSVG
rdkit.Chem.Draw.IPythonConsole.kekulizeStructures
rdkit.Chem.Draw.IPythonConsole.molSize
rdkit.Chem.Draw.IPythonConsole.molSize_3d
rdkit.Chem.Draw.MolDrawing'.__package__
rdkit.Chem.Draw.MolDrawing'.periodicTable
rdkit.Chem.Draw.SimilarityMaps.__package__
rdkit.Chem.Draw.SimilarityMaps.apDict
rdkit.Chem.Draw.SimilarityMaps.ttDict
rdkit.Chem.Draw.__package__
rdkit.Chem.Draw.aggCanvas.faceMap
rdkit.Chem.Draw.cairoCanvas.__package__
rdkit.Chem.Draw.cairoCanvas.defaultLibs
rdkit.Chem.Draw.cairoCanvas.ffi
rdkit.Chem.Draw.cairoCanvas.have_cairocffi
rdkit.Chem.Draw.cairoCanvas.have_pango
rdkit.Chem.Draw.cairoCanvas.libType
rdkit.Chem.Draw.cairoCanvas.pango
rdkit.Chem.Draw.cairoCanvas.pangocairo
rdkit.Chem.Draw.cairoCanvas.scriptPattern
rdkit.Chem.Draw.canvasbase.__package__
rdkit.Chem.Draw.mplCanvas.__package__
rdkit.Chem.Draw.qtCanvas.__package__
rdkit.Chem.Draw.rdMolDraw2D.__package__
rdkit.Chem.Draw.spingCanvas.__package__
rdkit.Chem.Draw.spingCanvas.faceMap
rdkit.Chem.Draw.tkLabel
rdkit.Chem.Draw.tkPI
rdkit.Chem.Draw.tkRoot
rdkit.Chem.EState.AtomTypes.__package__
rdkit.Chem.EState.AtomTypes._rawD
rdkit.Chem.EState.AtomTypes.esPatterns
rdkit.Chem.EState.EState.__package__
rdkit.Chem.EState.EState_VSA.__package__
rdkit.Chem.EState.EState_VSA.estateBins
rdkit.Chem.EState.EState_VSA.vsaBins
rdkit.Chem.EState.Fingerprinter.__package__
rdkit.Chem.EState.__package__
rdkit.Chem.EnumerateStereoisomers.__package__
rdkit.Chem.FastSDMolSupplier.__package__
rdkit.Chem.FastSDMolSupplier.__warningregistry__
rdkit.Chem.FeatFinderCLI.__package__
rdkit.Chem.FeatFinderCLI._splashMessage
rdkit.Chem.FeatFinderCLI.logger
rdkit.Chem.FeatFinderCLI.splitExpr
rdkit.Chem.FeatMaps.FeatMapParser.__package__
rdkit.Chem.FeatMaps.FeatMapPoint.__package__
rdkit.Chem.FeatMaps.FeatMapUtils.__package__
rdkit.Chem.FeatMaps.FeatMaps.__package__
rdkit.Chem.FeatMaps.__package__
rdkit.Chem.Features.FeatDirUtilsRD.__package__
rdkit.Chem.Features.ShowFeats.ALPHA
rdkit.Chem.Features.ShowFeats.BEGIN
rdkit.Chem.Features.ShowFeats.COLOR
rdkit.Chem.Features.ShowFeats.CYLINDER
rdkit.Chem.Features.ShowFeats.END
rdkit.Chem.Features.ShowFeats.NORMAL
rdkit.Chem.Features.ShowFeats.SPHERE
rdkit.Chem.Features.ShowFeats.TRIANGLE_FAN
rdkit.Chem.Features.ShowFeats.VERTEX
rdkit.Chem.Features.ShowFeats.__package__
rdkit.Chem.Features.ShowFeats._canonArrowhead
rdkit.Chem.Features.ShowFeats._featColors
rdkit.Chem.Features.ShowFeats._globalArrowCGO
rdkit.Chem.Features.ShowFeats._globalSphereCGO
rdkit.Chem.Features.ShowFeats._usage
rdkit.Chem.Features.ShowFeats._version
rdkit.Chem.Features.ShowFeats._welcomeMessage
rdkit.Chem.Features.ShowFeats.logger
rdkit.Chem.Features.ShowFeats.parser
rdkit.Chem.Features.__package__
rdkit.Chem.FilterCatalog.__package__
rdkit.Chem.Fingerprints.ClusterMols.__package__
rdkit.Chem.Fingerprints.ClusterMols._usageDoc
rdkit.Chem.Fingerprints.DbFpSupplier.__package__
rdkit.Chem.Fingerprints.FingerprintMols.__package__
rdkit.Chem.Fingerprints.FingerprintMols._usageDoc
rdkit.Chem.Fingerprints.MolSimilarity.__package__
rdkit.Chem.Fingerprints.MolSimilarity._dataSeq
rdkit.Chem.Fingerprints.MolSimilarity._usageDoc
rdkit.Chem.Fingerprints.SimilarityScreener.__package__
rdkit.Chem.Fingerprints.__package__
rdkit.Chem.Fraggle.FraggleSim.ACYC_SMARTS
rdkit.Chem.Fraggle.FraggleSim.CYC_SMARTS
rdkit.Chem.Fraggle.FraggleSim.FTYPE_ACYCLIC
rdkit.Chem.Fraggle.FraggleSim.FTYPE_CYCLIC
rdkit.Chem.Fraggle.FraggleSim.FTYPE_CYCLIC_ACYCLIC
rdkit.Chem.Fraggle.FraggleSim.__package__
rdkit.Chem.Fraggle.FraggleSim.cSma1
rdkit.Chem.Fraggle.FraggleSim.cSma2
rdkit.Chem.Fraggle.FraggleSim.dummyAtomQuery
rdkit.Chem.Fraggle.FraggleSim.modified_query_fps
rdkit.Chem.Fraggle.FraggleSim.rdkitFpParams
rdkit.Chem.Fraggle.__package__
rdkit.Chem.FragmentCatalog.__package__
rdkit.Chem.FragmentMatcher.__package__
rdkit.Chem.Fragments.__package__
rdkit.Chem.Fragments.defaultPatternFileName
rdkit.Chem.Fragments.fn
rdkit.Chem.Fragments.fns
rdkit.Chem.Fragments.name
rdkit.Chem.FunctionalGroups.__package__
rdkit.Chem.FunctionalGroups.groupDefns
rdkit.Chem.FunctionalGroups.hierarchy
rdkit.Chem.FunctionalGroups.lastData
rdkit.Chem.FunctionalGroups.lastFilename
rdkit.Chem.GraphDescriptors.__package__
rdkit.Chem.GraphDescriptors._log2val
rdkit.Chem.GraphDescriptors.periodicTable
rdkit.Chem.Graphs.__package__
rdkit.Chem.KEKULE_ALL
rdkit.Chem.LayeredFingerprint_substructLayers
rdkit.Chem.Lipinski.HAcceptorSmarts
rdkit.Chem.Lipinski.HDonorSmarts
rdkit.Chem.Lipinski.HeteroatomSmarts
rdkit.Chem.Lipinski.NHOHSmarts
rdkit.Chem.Lipinski.NOCountSmarts
rdkit.Chem.Lipinski.RotatableBondSmarts
rdkit.Chem.Lipinski.__package__
rdkit.Chem.Lipinski._bulkConvert
rdkit.Chem.Lipinski.nm
rdkit.Chem.Lipinski.txt
rdkit.Chem.MACCSkeys.__package__
rdkit.Chem.MACCSkeys.maccsKeys
rdkit.Chem.MACCSkeys.smartsPatts
rdkit.Chem.MCS.__package__
rdkit.Chem.MolCatalog.__package__
rdkit.Chem.MolDb.FingerprintUtils.__package__
rdkit.Chem.MolDb.FingerprintUtils.similarityMethods
rdkit.Chem.MolDb.FingerprintUtils.supportedSimilarityMethods
rdkit.Chem.MolDb.Loader.__package__
rdkit.Chem.MolDb.Loader_orig.__package__
rdkit.Chem.MolDb.Loader_orig.logger
rdkit.Chem.MolDb.Loader_sa.decBase
rdkit.Chem.MolDb.Loader_sa.logger
rdkit.Chem.MolDb.__package__
rdkit.Chem.MolKey.InchiInfo.UPD_APP
rdkit.Chem.MolKey.InchiInfo.__package__
rdkit.Chem.MolKey.InchiInfo.all_stereo_re
rdkit.Chem.MolKey.InchiInfo.console
rdkit.Chem.MolKey.InchiInfo.defined_stereo_re
rdkit.Chem.MolKey.InchiInfo.fixed_h_re
rdkit.Chem.MolKey.InchiInfo.h_layer_re
rdkit.Chem.MolKey.InchiInfo.isotope_re
rdkit.Chem.MolKey.InchiInfo.mobile_h_atoms_re
rdkit.Chem.MolKey.InchiInfo.mobile_h_group_re
rdkit.Chem.MolKey.InchiInfo.reconnected_re
rdkit.Chem.MolKey.InchiInfo.stereo_all_re
rdkit.Chem.MolKey.InchiInfo.stereo_re
rdkit.Chem.MolKey.InchiInfo.undef_stereo_re
rdkit.Chem.MolKey.InchiInfo.version_re
rdkit.Chem.MolKey.MolKey.BAD_SET
rdkit.Chem.MolKey.MolKey.CHIRAL_POS
rdkit.Chem.MolKey.MolKey.ERROR_DICT
rdkit.Chem.MolKey.MolKey.GET_STEREO_RE
rdkit.Chem.MolKey.MolKey.INCHI_COMPUTATION_ERROR
rdkit.Chem.MolKey.MolKey.INCHI_READWRITE_ERROR
rdkit.Chem.MolKey.MolKey.MOL_KEY_VERSION
rdkit.Chem.MolKey.MolKey.NULL_MOL
rdkit.Chem.MolKey.MolKey.NULL_SMILES_RE
rdkit.Chem.MolKey.MolKey.PATTERN_NULL_MOL
rdkit.Chem.MolKey.MolKey.RDKIT_CONVERSION_ERROR
rdkit.Chem.MolKey.MolKey.T_NULL_MOL
rdkit.Chem.MolKey.MolKey.__initCalled
rdkit.Chem.MolKey.MolKey.__package__
rdkit.Chem.MolKey.MolKey.stereo_code_dict
rdkit.Chem.MolKey.__package__
rdkit.Chem.MolProps
rdkit.Chem.MolSurf.__package__
rdkit.Chem.MolSurf.bondScaleFacts
rdkit.Chem.MolSurf.chgBins
rdkit.Chem.MolSurf.logpBins
rdkit.Chem.MolSurf.mrBins
rdkit.Chem.MolSurf.radCol
rdkit.Chem.NoProps
rdkit.Chem.PandasTools.__package__
rdkit.Chem.PandasTools._originalSettings
rdkit.Chem.PandasTools._saltRemover
rdkit.Chem.PandasTools.highlightSubstructures
rdkit.Chem.PandasTools.molRepresentation
rdkit.Chem.PandasTools.molSize
rdkit.Chem.PeriodicTable'.__package__
rdkit.Chem.PeriodicTable'.end
rdkit.Chem.PeriodicTable'.entry
rdkit.Chem.PeriodicTable'.hallKierAlphas
rdkit.Chem.PeriodicTable'.line
rdkit.Chem.PeriodicTable'.metalNames
rdkit.Chem.PeriodicTable'.metalNumList
rdkit.Chem.PeriodicTable'.metalRanges
rdkit.Chem.PeriodicTable'.nameTable
rdkit.Chem.PeriodicTable'.numTable
rdkit.Chem.PeriodicTable'.periodicData
rdkit.Chem.PeriodicTable'.splitLine
rdkit.Chem.PeriodicTable'.start
rdkit.Chem.PeriodicTable'.t
rdkit.Chem.PeriodicTable'.x
rdkit.Chem.Pharm2D.Generate.__package__
rdkit.Chem.Pharm2D.Generate._verbose
rdkit.Chem.Pharm2D.Generate.logger
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.__package__
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.defaultBins
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.factory
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.fdef
rdkit.Chem.Pharm2D.Matcher.__package__
rdkit.Chem.Pharm2D.Matcher._verbose
rdkit.Chem.Pharm2D.SigFactory.__package__
rdkit.Chem.Pharm2D.SigFactory._verbose
rdkit.Chem.Pharm2D.Utils.__package__
rdkit.Chem.Pharm2D.Utils._countCache
rdkit.Chem.Pharm2D.Utils._indexCombinations
rdkit.Chem.Pharm2D.Utils._numCombDict
rdkit.Chem.Pharm2D.Utils._trianglesInPharmacophore
rdkit.Chem.Pharm2D.Utils._verbose
rdkit.Chem.Pharm2D.Utils.nDistPointDict
rdkit.Chem.Pharm2D.Utils.nPointDistDict
rdkit.Chem.Pharm2D.__package__
rdkit.Chem.Pharm3D.EmbedLib.__package__
rdkit.Chem.Pharm3D.EmbedLib._times
rdkit.Chem.Pharm3D.EmbedLib.defaultFeatLength
rdkit.Chem.Pharm3D.EmbedLib.logger
rdkit.Chem.Pharm3D.ExcludedVolume.__package__
rdkit.Chem.Pharm3D.Pharmacophore.__package__
rdkit.Chem.Pharm3D.Pharmacophore.logger
rdkit.Chem.Pharm3D.__package__
rdkit.Chem.PrivateProps
rdkit.Chem.PropertyMol.__package__
rdkit.Chem.PyMol.__package__
rdkit.Chem.PyMol._server
rdkit.Chem.QED.AcceptorSmarts
rdkit.Chem.QED.Acceptors
rdkit.Chem.QED.AliphaticRings
rdkit.Chem.QED.StructuralAlertSmarts
rdkit.Chem.QED.StructuralAlerts
rdkit.Chem.QED.WEIGHT_MAX
rdkit.Chem.QED.WEIGHT_MEAN
rdkit.Chem.QED.WEIGHT_NONE
rdkit.Chem.QED.__package__
rdkit.Chem.QED.adsParameters
rdkit.Chem.QED.hba
rdkit.Chem.QED.smarts
rdkit.Chem.QueryAtomData
rdkit.Chem.Randomize.__package__
rdkit.Chem.Recap.__package__
rdkit.Chem.Recap.reactionDefs
rdkit.Chem.Recap.reactions
rdkit.Chem.Recap.x
rdkit.Chem.ReducedGraphs.__package__
rdkit.Chem.SANITIZE_ADJUSTHS
rdkit.Chem.SANITIZE_ALL
rdkit.Chem.SANITIZE_CLEANUP
rdkit.Chem.SANITIZE_CLEANUPCHIRALITY
rdkit.Chem.SANITIZE_FINDRADICALS
rdkit.Chem.SANITIZE_KEKULIZE
rdkit.Chem.SANITIZE_NONE
rdkit.Chem.SANITIZE_PROPERTIES
rdkit.Chem.SANITIZE_SETAROMATICITY
rdkit.Chem.SANITIZE_SETCONJUGATION
rdkit.Chem.SANITIZE_SETHYBRIDIZATION
rdkit.Chem.SANITIZE_SYMMRINGS
rdkit.Chem.SATIS.__package__
rdkit.Chem.SATIS.aldehydePatt
rdkit.Chem.SATIS.amidePatt
rdkit.Chem.SATIS.carboxylPatt
rdkit.Chem.SATIS.carboxylatePatt
rdkit.Chem.SATIS.esterPatt
rdkit.Chem.SATIS.ketonePatt
rdkit.Chem.SATIS.specialCases
rdkit.Chem.SaltRemover.__package__
rdkit.Chem.Scaffolds.MurckoScaffold.__package__
rdkit.Chem.Scaffolds.MurckoScaffold.aromaticNTransform
rdkit.Chem.Scaffolds.MurckoScaffold.murckoPatts
rdkit.Chem.Scaffolds.MurckoScaffold.murckoQ
rdkit.Chem.Scaffolds.MurckoScaffold.murckoTransforms
rdkit.Chem.Scaffolds.MurckoScaffold.x
rdkit.Chem.Scaffolds.ScaffoldTree.__package__
rdkit.Chem.Scaffolds.__package__
rdkit.Chem.ShowMols.__package__
rdkit.Chem.SimpleEnum.Enumerator.__package__
rdkit.Chem.SimpleEnum.__package__
rdkit.Chem.Subshape.BuilderUtils.__package__
rdkit.Chem.Subshape.SubshapeAligner.__package__
rdkit.Chem.Subshape.SubshapeAligner.logger
rdkit.Chem.Subshape.SubshapeBuilder.__package__
rdkit.Chem.Subshape.SubshapeObjects.__package__
rdkit.Chem.Subshape.__package__
rdkit.Chem.Suppliers.DbMolSupplier.__package__
rdkit.Chem.Suppliers.MolSupplier.__package__
rdkit.Chem.Suppliers.__package__
rdkit.Chem.TemplateAlign.__package__
rdkit.Chem.TorsionFingerprints.__package__
rdkit.Chem.UNCONSTRAINED_ANIONS
rdkit.Chem.UNCONSTRAINED_CATIONS
rdkit.Chem.__package__
rdkit.Chem.fmcs.__package__
rdkit.Chem.fmcs.eleno
rdkit.Chem.fmcs.fmcs'.__package__
rdkit.Chem.fmcs.fmcs'.__version_info
rdkit.Chem.fmcs.fmcs'._atom_class_dict
rdkit.Chem.fmcs.fmcs'._atom_smarts_no_aromaticity
rdkit.Chem.fmcs.fmcs'._available_closures
rdkit.Chem.fmcs.fmcs'._isotope_dict
rdkit.Chem.fmcs.fmcs'._maximize_options
rdkit.Chem.fmcs.fmcs'._prime_stream
rdkit.Chem.fmcs.fmcs'._primes
rdkit.Chem.fmcs.fmcs'.atom_typers
rdkit.Chem.fmcs.fmcs'.bond_typers
rdkit.Chem.fmcs.fmcs'.compare_shortcuts
rdkit.Chem.fmcs.fmcs'.eleno
rdkit.Chem.fmcs.fmcs'.range_pat
rdkit.Chem.fmcs.fmcs'.structure_format_functions
rdkit.Chem.fmcs.fmcs'.value_pat
rdkit.Chem.inchi.INCHI_AVAILABLE
rdkit.Chem.inchi.__package__
rdkit.Chem.inchi.logLevelToLogFunctionLookup
rdkit.Chem.inchi.logger
rdkit.Chem.rdChemReactions.SANITIZE_ADJUST_REACTANTS
rdkit.Chem.rdChemReactions.SANITIZE_ALL
rdkit.Chem.rdChemReactions.SANITIZE_ATOM_MAPS
rdkit.Chem.rdChemReactions.SANITIZE_MERGEHS
rdkit.Chem.rdChemReactions.SANITIZE_NONE
rdkit.Chem.rdChemReactions.SANITIZE_RGROUP_NAMES
rdkit.Chem.rdChemReactions.__package__
rdkit.Chem.rdChemicalFeatures.__package__
rdkit.Chem.rdDepictor.__package__
rdkit.Chem.rdDistGeom.__package__
rdkit.Chem.rdFMCS.__package__
rdkit.Chem.rdForceFieldHelpers.__package__
rdkit.Chem.rdMMPA.__package__
rdkit.Chem.rdMolAlign.__package__
rdkit.Chem.rdMolCatalog.__package__
rdkit.Chem.rdMolChemicalFeatures.__package__
rdkit.Chem.rdMolDescriptors._CalcAUTOCORR2D_version
rdkit.Chem.rdMolDescriptors._CalcAUTOCORR3D_version
rdkit.Chem.rdMolDescriptors._CalcAsphericity_version
rdkit.Chem.rdMolDescriptors._CalcChi0n_version
rdkit.Chem.rdMolDescriptors._CalcChi0v_version
rdkit.Chem.rdMolDescriptors._CalcChi1n_version
rdkit.Chem.rdMolDescriptors._CalcChi1v_version
rdkit.Chem.rdMolDescriptors._CalcChi2n_version
rdkit.Chem.rdMolDescriptors._CalcChi2v_version
rdkit.Chem.rdMolDescriptors._CalcChi3n_version
rdkit.Chem.rdMolDescriptors._CalcChi3v_version
rdkit.Chem.rdMolDescriptors._CalcChi4n_version
rdkit.Chem.rdMolDescriptors._CalcChi4v_version
rdkit.Chem.rdMolDescriptors._CalcChiNn_version
rdkit.Chem.rdMolDescriptors._CalcChiNv_version
rdkit.Chem.rdMolDescriptors._CalcCrippenDescriptors_version
rdkit.Chem.rdMolDescriptors._CalcEccentricity_version
rdkit.Chem.rdMolDescriptors._CalcExactMolWt_version
rdkit.Chem.rdMolDescriptors._CalcFractionCSP3_version
rdkit.Chem.rdMolDescriptors._CalcGETAWAY_version
rdkit.Chem.rdMolDescriptors._CalcHallKierAlpha_version
rdkit.Chem.rdMolDescriptors._CalcInertialShapeFactor_version
rdkit.Chem.rdMolDescriptors._CalcKappa1_version
rdkit.Chem.rdMolDescriptors._CalcKappa2_version
rdkit.Chem.rdMolDescriptors._CalcKappa3_version
rdkit.Chem.rdMolDescriptors._CalcLabuteASA_version
rdkit.Chem.rdMolDescriptors._CalcMORSE_version
rdkit.Chem.rdMolDescriptors._CalcMolFormula_version
rdkit.Chem.rdMolDescriptors._CalcMolWt_version
rdkit.Chem.rdMolDescriptors._CalcNPR1_version
rdkit.Chem.rdMolDescriptors._CalcNPR2_version
rdkit.Chem.rdMolDescriptors._CalcNumAliphaticCarbocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumAliphaticHeterocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumAliphaticRings_version
rdkit.Chem.rdMolDescriptors._CalcNumAmideBonds_version
rdkit.Chem.rdMolDescriptors._CalcNumAromaticCarbocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumAromaticHeterocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumAromaticRings_version
rdkit.Chem.rdMolDescriptors._CalcNumAtomStereoCenters_version
rdkit.Chem.rdMolDescriptors._CalcNumBridgeheadAtoms_version
rdkit.Chem.rdMolDescriptors._CalcNumHBA_version
rdkit.Chem.rdMolDescriptors._CalcNumHBD_version
rdkit.Chem.rdMolDescriptors._CalcNumHeteroatoms_version
rdkit.Chem.rdMolDescriptors._CalcNumHeterocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumLipinskiHBA_version
rdkit.Chem.rdMolDescriptors._CalcNumLipinskiHBD_version
rdkit.Chem.rdMolDescriptors._CalcNumRings_version
rdkit.Chem.rdMolDescriptors._CalcNumRotatableBonds_version
rdkit.Chem.rdMolDescriptors._CalcNumSaturatedCarbocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumSaturatedHeterocycles_version
rdkit.Chem.rdMolDescriptors._CalcNumSaturatedRings_version
rdkit.Chem.rdMolDescriptors._CalcNumSpiroAtoms_version
rdkit.Chem.rdMolDescriptors._CalcNumUnspecifiedAtomStereoCenters_version
rdkit.Chem.rdMolDescriptors._CalcPBF_version
rdkit.Chem.rdMolDescriptors._CalcPMI1_version
rdkit.Chem.rdMolDescriptors._CalcPMI2_version
rdkit.Chem.rdMolDescriptors._CalcPMI3_version
rdkit.Chem.rdMolDescriptors._CalcRDF_version
rdkit.Chem.rdMolDescriptors._CalcRadiusOfGyration_version
rdkit.Chem.rdMolDescriptors._CalcSpherocityIndex_version
rdkit.Chem.rdMolDescriptors._CalcTPSA_version
rdkit.Chem.rdMolDescriptors._CalcWHIM_version
rdkit.Chem.rdMolDescriptors._ConnectivityInvariants_version
rdkit.Chem.rdMolDescriptors._FeatureInvariants_version
rdkit.Chem.rdMolDescriptors._MorganFingerprint_version
rdkit.Chem.rdMolDescriptors.__package__
rdkit.Chem.rdMolHash.__package__
rdkit.Chem.rdMolTransforms.__package__
rdkit.Chem.rdPartialCharges.__package__
rdkit.Chem.rdRGroupDecomposition.AtomIndexLabels
rdkit.Chem.rdRGroupDecomposition.AtomMap
rdkit.Chem.rdRGroupDecomposition.AtomMapLabels
rdkit.Chem.rdRGroupDecomposition.AutoDetect
rdkit.Chem.rdRGroupDecomposition.Exhaustive
rdkit.Chem.rdRGroupDecomposition.Greedy
rdkit.Chem.rdRGroupDecomposition.GreedyChunks
rdkit.Chem.rdRGroupDecomposition.Isotope
rdkit.Chem.rdRGroupDecomposition.IsotopeLabels
rdkit.Chem.rdRGroupDecomposition.MCS
rdkit.Chem.rdRGroupDecomposition.MDLRGroup
rdkit.Chem.rdRGroupDecomposition.None
rdkit.Chem.rdRGroupDecomposition.RelabelDuplicateLabels
rdkit.Chem.rdRGroupDecomposition.__package__
rdkit.Chem.rdReducedGraphs.__package__
rdkit.Chem.rdSLNParse.__package__
rdkit.Chem.rdShapeHelpers.__package__
rdkit.Chem.rdStructChecker.__package__
rdkit.Chem.rdSubstructLibrary.__package__
rdkit.Chem.rdchem.ALLOW_CHARGE_SEPARATION
rdkit.Chem.rdchem.ALLOW_INCOMPLETE_OCTETS
rdkit.Chem.rdchem.AllProps
rdkit.Chem.rdchem.AtomProps
rdkit.Chem.rdchem.BondProps
rdkit.Chem.rdchem.CHI_OTHER
rdkit.Chem.rdchem.CHI_TETRAHEDRAL_CCW
rdkit.Chem.rdchem.CHI_TETRAHEDRAL_CW
rdkit.Chem.rdchem.CHI_UNSPECIFIED
rdkit.Chem.rdchem.COMPOSITE_AND
rdkit.Chem.rdchem.COMPOSITE_OR
rdkit.Chem.rdchem.COMPOSITE_XOR
rdkit.Chem.rdchem.ComputedProps
rdkit.Chem.rdchem.KEKULE_ALL
rdkit.Chem.rdchem.MolProps
rdkit.Chem.rdchem.NoProps
rdkit.Chem.rdchem.PrivateProps
rdkit.Chem.rdchem.QueryAtomData
rdkit.Chem.rdchem.UNCONSTRAINED_ANIONS
rdkit.Chem.rdchem.UNCONSTRAINED_CATIONS
rdkit.Chem.rdchem.__package__
rdkit.Chem.rdfiltercatalog.__package__
rdkit.Chem.rdfragcatalog.__package__
rdkit.Chem.rdinchi.__package__
rdkit.Chem.rdmolfiles.__package__
rdkit.Chem.rdmolops.ADJUST_IGNOREALL
rdkit.Chem.rdmolops.ADJUST_IGNORECHAINS
rdkit.Chem.rdmolops.ADJUST_IGNOREDUMMIES
rdkit.Chem.rdmolops.ADJUST_IGNORENONDUMMIES
rdkit.Chem.rdmolops.ADJUST_IGNORENONE
rdkit.Chem.rdmolops.ADJUST_IGNORERINGS
rdkit.Chem.rdmolops.AROMATICITY_CUSTOM
rdkit.Chem.rdmolops.AROMATICITY_DEFAULT
rdkit.Chem.rdmolops.AROMATICITY_RDKIT
rdkit.Chem.rdmolops.AROMATICITY_SIMPLE
rdkit.Chem.rdmolops.LayeredFingerprint_substructLayers
rdkit.Chem.rdmolops.SANITIZE_ADJUSTHS
rdkit.Chem.rdmolops.SANITIZE_ALL
rdkit.Chem.rdmolops.SANITIZE_CLEANUP
rdkit.Chem.rdmolops.SANITIZE_CLEANUPCHIRALITY
rdkit.Chem.rdmolops.SANITIZE_FINDRADICALS
rdkit.Chem.rdmolops.SANITIZE_KEKULIZE
rdkit.Chem.rdmolops.SANITIZE_NONE
rdkit.Chem.rdmolops.SANITIZE_PROPERTIES
rdkit.Chem.rdmolops.SANITIZE_SETAROMATICITY
rdkit.Chem.rdmolops.SANITIZE_SETCONJUGATION
rdkit.Chem.rdmolops.SANITIZE_SETHYBRIDIZATION
rdkit.Chem.rdmolops.SANITIZE_SYMMRINGS
rdkit.Chem.rdmolops._LayeredFingerprint_version
rdkit.Chem.rdmolops._RDKFingerprint_version
rdkit.Chem.rdmolops.__package__
rdkit.Chem.rdqueries.__package__
rdkit.Chem.rdtrajectory.__package__
rdkit.DataManip.Metric.__package__
rdkit.DataManip.Metric.rdMetricMatrixCalc.__package__
rdkit.DataManip.__package__
rdkit.DataStructs.BitEnsemble.__package__
rdkit.DataStructs.BitEnsembleDb.__package__
rdkit.DataStructs.BitUtils.__package__
rdkit.DataStructs.EIGHTBITVALUE
rdkit.DataStructs.FOURBITVALUE
rdkit.DataStructs.HierarchyVis.__package__
rdkit.DataStructs.HierarchyVis.visOpts
rdkit.DataStructs.LazySignature.__package__
rdkit.DataStructs.ONEBITVALUE
rdkit.DataStructs.SIXTEENBITVALUE
rdkit.DataStructs.TWOBITVALUE
rdkit.DataStructs.TopNContainer.__package__
rdkit.DataStructs.VectCollection.__package__
rdkit.DataStructs.__doc__
rdkit.DataStructs.__package__
rdkit.DataStructs.cDataStructs.EIGHTBITVALUE
rdkit.DataStructs.cDataStructs.FOURBITVALUE
rdkit.DataStructs.cDataStructs.ONEBITVALUE
rdkit.DataStructs.cDataStructs.SIXTEENBITVALUE
rdkit.DataStructs.cDataStructs.TWOBITVALUE
rdkit.DataStructs.cDataStructs.__package__
rdkit.DataStructs.similarityFunctions
rdkit.Dbase.DbConnection.__package__
rdkit.Dbase.DbInfo.__package__
rdkit.Dbase.DbInfo.sqlBinTypes
rdkit.Dbase.DbInfo.sqlFloatTypes
rdkit.Dbase.DbInfo.sqlIntTypes
rdkit.Dbase.DbInfo.sqlTextTypes
rdkit.Dbase.DbModule.RDTestDatabase
rdkit.Dbase.DbModule.__package__
rdkit.Dbase.DbModule.binaryTypeName
rdkit.Dbase.DbModule.dbFileWildcard
rdkit.Dbase.DbModule.fileWildcard
rdkit.Dbase.DbModule.getDbSql
rdkit.Dbase.DbModule.getTablesAndViewsSql
rdkit.Dbase.DbModule.getTablesSql
rdkit.Dbase.DbModule.placeHolder
rdkit.Dbase.DbModule.sqlBinTypes
rdkit.Dbase.DbModule.sqlFloatTypes
rdkit.Dbase.DbModule.sqlIntTypes
rdkit.Dbase.DbModule.sqlTextTypes
rdkit.Dbase.DbReport.GetReportlabTable
rdkit.Dbase.DbReport.QuickReport
rdkit.Dbase.DbReport.__package__
rdkit.Dbase.DbReport.hasCDX
rdkit.Dbase.DbResultSet.__package__
rdkit.Dbase.DbUtils.__package__
rdkit.Dbase.StorageUtils.__package__
rdkit.Dbase.StorageUtils.__test__
rdkit.Dbase.StorageUtils._roundtripTests
rdkit.Dbase.__package__
rdkit.DistanceGeometry.DistGeom.__package__
rdkit.DistanceGeometry.__package__
rdkit.ForceField.__package__
rdkit.ForceField.rdForceField.__package__
rdkit.Geometry.__package__
rdkit.Geometry.rdGeometry.__package__
rdkit.ML.AnalyzeComposite.__VERSION_STRING
rdkit.ML.AnalyzeComposite.__package__
rdkit.ML.BuildComposite.__VERSION_STRING
rdkit.ML.BuildComposite.__package__
rdkit.ML.BuildComposite._runDetails
rdkit.ML.BuildComposite._verbose
rdkit.ML.Cluster.Butina.__package__
rdkit.ML.Cluster.Butina.logger
rdkit.ML.Cluster.ClusterUtils.__package__
rdkit.ML.Cluster.ClusterVis.__package__
rdkit.ML.Cluster.Clustering.__package__
rdkit.ML.Cluster.Clusters.CMPTOL
rdkit.ML.Cluster.Clusters.__package__
rdkit.ML.Cluster.Murtagh.CENTROID
rdkit.ML.Cluster.Murtagh.CLINK
rdkit.ML.Cluster.Murtagh.GOWER
rdkit.ML.Cluster.Murtagh.MCQUITTY
rdkit.ML.Cluster.Murtagh.SLINK
rdkit.ML.Cluster.Murtagh.UPGMA
rdkit.ML.Cluster.Murtagh.WARDS
rdkit.ML.Cluster.Murtagh.__package__
rdkit.ML.Cluster.Murtagh.methods
rdkit.ML.Cluster.Resemblance.__package__
rdkit.ML.Cluster.Resemblance.methods
rdkit.ML.Cluster.Standardize.__package__
rdkit.ML.Cluster.Standardize.methods
rdkit.ML.Cluster.__package__
rdkit.ML.Composite.AdjustComposite.__package__
rdkit.ML.Composite.BayesComposite.__package__
rdkit.ML.Composite.Composite.__package__
rdkit.ML.Composite.__package__
rdkit.ML.CompositeRun.__package__
rdkit.ML.Data.DataUtils.__package__
rdkit.ML.Data.FindQuantBounds.__package__
rdkit.ML.Data.MLData.__package__
rdkit.ML.Data.MLData.numericTypes
rdkit.ML.Data.Quantize.__package__
rdkit.ML.Data.Quantize._float_tol
rdkit.ML.Data.Quantize.hascQuantize
rdkit.ML.Data.SplitData.SeqTypes
rdkit.ML.Data.SplitData.__package__
rdkit.ML.Data.Stats.__package__
rdkit.ML.Data.Stats.tConfs
rdkit.ML.Data.Stats.tTable
rdkit.ML.Data.Transforms.__package__
rdkit.ML.Data.Transforms._availTransforms
rdkit.ML.Data.__package__
rdkit.ML.Data.cQuantize.__package__
rdkit.ML.DecTree.BuildQuantTree.__package__
rdkit.ML.DecTree.BuildSigTree.CMIM
rdkit.ML.DecTree.BuildSigTree.__package__
rdkit.ML.DecTree.CrossValidate.__package__
rdkit.ML.DecTree.DecTree.__package__
rdkit.ML.DecTree.Forest.__package__
rdkit.ML.DecTree.ID3.__package__
rdkit.ML.DecTree.PruneTree.__package__
rdkit.ML.DecTree.PruneTree._verbose
rdkit.ML.DecTree.QuantTree.__package__
rdkit.ML.DecTree.SigTree.__package__
rdkit.ML.DecTree.Tree.__package__
rdkit.ML.DecTree.TreeUtils.__package__
rdkit.ML.DecTree.TreeVis.__package__
rdkit.ML.DecTree.TreeVis.visOpts
rdkit.ML.DecTree.__package__
rdkit.ML.Descriptors.CompoundDescriptors.__package__
rdkit.ML.Descriptors.CompoundDescriptors.countOptions
rdkit.ML.Descriptors.Descriptors.__package__
rdkit.ML.Descriptors.MoleculeDescriptors.__package__
rdkit.ML.Descriptors.MoleculeDescriptors.logger
rdkit.ML.Descriptors.Parser.__DEBUG
rdkit.ML.Descriptors.Parser.__package__
rdkit.ML.Descriptors.Parser.e
rdkit.ML.Descriptors.Parser.knownMethods
rdkit.ML.Descriptors.Parser.pi
rdkit.ML.Descriptors.__package__
rdkit.ML.EnrichPlot.__VERSION_STRING
rdkit.ML.EnrichPlot.__package__
rdkit.ML.GrowComposite.__VERSION_STRING
rdkit.ML.GrowComposite.__package__
rdkit.ML.GrowComposite._runDetails
rdkit.ML.GrowComposite._verbose
rdkit.ML.InfoTheory.BIASCHISQUARE
rdkit.ML.InfoTheory.BIASENTROPY
rdkit.ML.InfoTheory.BitClusterer.__package__
rdkit.ML.InfoTheory.BitRank.__package__
rdkit.ML.InfoTheory.CHISQUARE
rdkit.ML.InfoTheory.ENTROPY
rdkit.ML.InfoTheory.__package__
rdkit.ML.InfoTheory.entropy.__package__
rdkit.ML.InfoTheory.entropy._log2
rdkit.ML.InfoTheory.entropy.hascEntropy
rdkit.ML.InfoTheory.rdInfoTheory.BIASCHISQUARE
rdkit.ML.InfoTheory.rdInfoTheory.BIASENTROPY
rdkit.ML.InfoTheory.rdInfoTheory.CHISQUARE
rdkit.ML.InfoTheory.rdInfoTheory.ENTROPY
rdkit.ML.InfoTheory.rdInfoTheory.__package__
rdkit.ML.KNN.CrossValidate.__package__
rdkit.ML.KNN.DistFunctions.__package__
rdkit.ML.KNN.KNNClassificationModel.__package__
rdkit.ML.KNN.KNNModel.__package__
rdkit.ML.KNN.KNNRegressionModel.__package__
rdkit.ML.KNN.__package__
rdkit.ML.MLUtils.VoteImg.__package__
rdkit.ML.MLUtils.__package__
rdkit.ML.MatOps.__package__
rdkit.ML.ModelPackage.PackageUtils.__package__
rdkit.ML.ModelPackage.Packager.__package__
rdkit.ML.ModelPackage.__package__
rdkit.ML.NaiveBayes.ClassificationModel.__package__
rdkit.ML.NaiveBayes.CrossValidate.CMIM
rdkit.ML.NaiveBayes.CrossValidate.__package__
rdkit.ML.NaiveBayes.__package__
rdkit.ML.Neural.ActFuncs.__package__
rdkit.ML.Neural.CrossValidate.__package__
rdkit.ML.Neural.NetNode.__package__
rdkit.ML.Neural.Network.__package__
rdkit.ML.Neural.Trainers.__package__
rdkit.ML.Neural.__package__
rdkit.ML.SLT.Risk.__package__
rdkit.ML.SLT.__package__
rdkit.ML.Scoring.Scoring.__package__
rdkit.ML.Scoring.__package__
rdkit.ML.ScreenComposite.__VERSION_STRING
rdkit.ML.ScreenComposite.__package__
rdkit.ML.ScreenComposite._details
rdkit.ML.ScreenComposite.hasPil
rdkit.ML.__package__
rdkit.ML.files.__package__
rdkit.Numerics.__package__
rdkit.Numerics.rdAlignment.__package__
rdkit.SimDivFilters.CENTROID
rdkit.SimDivFilters.CLINK
rdkit.SimDivFilters.GOWER
rdkit.SimDivFilters.MCQUITTY
rdkit.SimDivFilters.SLINK
rdkit.SimDivFilters.SimilarityPickers.__package__
rdkit.SimDivFilters.UPGMA
rdkit.SimDivFilters.WARD
rdkit.SimDivFilters.__package__
rdkit.SimDivFilters.rdSimDivPickers.CENTROID
rdkit.SimDivFilters.rdSimDivPickers.CLINK
rdkit.SimDivFilters.rdSimDivPickers.GOWER
rdkit.SimDivFilters.rdSimDivPickers.MCQUITTY
rdkit.SimDivFilters.rdSimDivPickers.SLINK
rdkit.SimDivFilters.rdSimDivPickers.UPGMA
rdkit.SimDivFilters.rdSimDivPickers.WARD
rdkit.SimDivFilters.rdSimDivPickers.__package__
rdkit.VLib.Filter.__package__
rdkit.VLib.Node.__package__
rdkit.VLib.NodeLib.DbMolSupply.__package__
rdkit.VLib.NodeLib.DbPickleSupplier.__package__
rdkit.VLib.NodeLib.DbPickleSupplier._dataSeq
rdkit.VLib.NodeLib.SDSupply.__package__
rdkit.VLib.NodeLib.SmartsMolFilter.__package__
rdkit.VLib.NodeLib.SmartsRemover.__package__
rdkit.VLib.NodeLib.SmartsRemover.__test__
rdkit.VLib.NodeLib.SmartsRemover.biggerTest
rdkit.VLib.NodeLib.SmilesDupeFilter.__package__
rdkit.VLib.NodeLib.SmilesOutput.__package__
rdkit.VLib.NodeLib.SmilesSupply.__package__
rdkit.VLib.NodeLib.__package__
rdkit.VLib.NodeLib.demo.__package__
rdkit.VLib.NodeLib.demo.atsFilter
rdkit.VLib.NodeLib.demo.dupeFilter
rdkit.VLib.NodeLib.demo.i
rdkit.VLib.NodeLib.demo.io
rdkit.VLib.NodeLib.demo.metals
rdkit.VLib.NodeLib.demo.mols
rdkit.VLib.NodeLib.demo.output
rdkit.VLib.NodeLib.demo.remover
rdkit.VLib.NodeLib.demo.salts
rdkit.VLib.NodeLib.demo.smaFilter
rdkit.VLib.NodeLib.demo.smis
rdkit.VLib.NodeLib.demo.supplier
rdkit.VLib.NodeLib.demo.x
rdkit.VLib.Output.__package__
rdkit.VLib.Supply.__package__
rdkit.VLib.Transform.__package__
rdkit.VLib.__package__
rdkit.rdBase'.__package__
rdkit.rdBase'.boostVersion
rdkit.rdBase'.rdkitBuild
rdkit.rdBase'.rdkitVersion

[hide private]