RDCatalog::Catalog< entryType, paramType > Class Template Reference

abstract base class for a catalog object More...

#include <Catalog.h>

Inheritance diagram for RDCatalog::Catalog< entryType, paramType >:

Public Types
typedef entryType	entryType_t
typedef paramType	paramType_t

Public Member Functions
	Catalog ()
virtual	~Catalog ()
virtual std::string	Serialize () const =0
	return a serialized form of the Catalog as an std::string
virtual unsigned int	addEntry (entryType *entry, bool updateFPLength=true)=0
	adds an entry to the catalog
virtual const entryType *	getEntryWithIdx (unsigned int idx) const =0
	returns a particular entry in the Catalog
virtual unsigned int	getNumEntries () const =0
	returns the number of entries
unsigned int	getFPLength () const
	returns the length of our fingerprint
void	setFPLength (unsigned int val)
	sets our fingerprint length
virtual void	setCatalogParams (const paramType *params)
	sets our parameters by copying the params argument
const paramType *	getCatalogParams () const
	returns a pointer to our parameters

Protected Attributes
unsigned int	d_fpLength {0}
	the length of our fingerprint
paramType *	dp_cParams
	our params object

Detailed Description

template<class entryType, class paramType>
class RDCatalog::Catalog< entryType, paramType >

abstract base class for a catalog object

Definition at line 40 of file Catalog.h.

Member Typedef Documentation

entryType_t

template<class entryType , class paramType >

typedef entryType RDCatalog::Catalog< entryType, paramType >::entryType_t

Definition at line 42 of file Catalog.h.

paramType_t

template<class entryType , class paramType >

typedef paramType RDCatalog::Catalog< entryType, paramType >::paramType_t

Definition at line 43 of file Catalog.h.

Constructor & Destructor Documentation

Catalog()

template<class entryType , class paramType >

RDCatalog::Catalog< entryType, paramType >::Catalog ( )

inline

Definition at line 46 of file Catalog.h.

~Catalog()

template<class entryType , class paramType >

virtual RDCatalog::Catalog< entryType, paramType >::~Catalog ( )

inlinevirtual

Definition at line 49 of file Catalog.h.

References RDCatalog::Catalog< entryType, paramType >::dp_cParams.

Member Function Documentation

addEntry()

template<class entryType , class paramType >

virtual unsigned int RDCatalog::Catalog< entryType, paramType >::addEntry ( entryType * entry, bool updateFPLength = true )

pure virtual

adds an entry to the catalog

Parameters

entry	the entry to be added
updateFPLength	(optional) if this is true, our internal fingerprint length will also be updated.

Implemented in RDCatalog::HierarchCatalog< entryType, paramType, orderType >.

getCatalogParams()

template<class entryType , class paramType >

const paramType * RDCatalog::Catalog< entryType, paramType >::getCatalogParams ( ) const

inline

returns a pointer to our parameters

Definition at line 101 of file Catalog.h.

References RDCatalog::Catalog< entryType, paramType >::dp_cParams.

Referenced by RDCatalog::HierarchCatalog< entryType, paramType, orderType >::toStream().

getEntryWithIdx()

template<class entryType , class paramType >

virtual const entryType * RDCatalog::Catalog< entryType, paramType >::getEntryWithIdx ( unsigned int idx ) const

pure virtual

returns a particular entry in the Catalog

Implemented in RDCatalog::HierarchCatalog< entryType, paramType, orderType >, and RDKit::FilterCatalog.

getFPLength()

template<class entryType , class paramType >

unsigned int RDCatalog::Catalog< entryType, paramType >::getFPLength ( ) const

inline

returns the length of our fingerprint

Definition at line 77 of file Catalog.h.

References RDCatalog::Catalog< entryType, paramType >::d_fpLength.

Referenced by RDCatalog::HierarchCatalog< entryType, paramType, orderType >::addEntry(), RDCatalog::HierarchCatalog< entryType, paramType, orderType >::getEntryWithBitId(), RDCatalog::HierarchCatalog< entryType, paramType, orderType >::getIdOfEntryWithBitId(), and RDCatalog::HierarchCatalog< entryType, paramType, orderType >::toStream().

getNumEntries()

template<class entryType , class paramType >

virtual unsigned int RDCatalog::Catalog< entryType, paramType >::getNumEntries ( ) const

pure virtual

returns the number of entries

Implemented in RDCatalog::HierarchCatalog< entryType, paramType, orderType >, and RDKit::FilterCatalog.

Serialize()

template<class entryType , class paramType >

virtual std::string RDCatalog::Catalog< entryType, paramType >::Serialize ( ) const

pure virtual

return a serialized form of the Catalog as an std::string

Implemented in RDCatalog::HierarchCatalog< entryType, paramType, orderType >, and RDKit::FilterCatalog.

setCatalogParams()

template<class entryType , class paramType >

virtual void RDCatalog::Catalog< entryType, paramType >::setCatalogParams ( const paramType * params )

inlinevirtual

sets our parameters by copying the params argument

Definition at line 85 of file Catalog.h.

References RDCatalog::Catalog< entryType, paramType >::dp_cParams, and PRECONDITION.

Referenced by RDCatalog::HierarchCatalog< entryType, paramType, orderType >::HierarchCatalog(), and RDCatalog::HierarchCatalog< entryType, paramType, orderType >::initFromStream().

setFPLength()

template<class entryType , class paramType >

void RDCatalog::Catalog< entryType, paramType >::setFPLength ( unsigned int val )

inline

sets our fingerprint length

Definition at line 81 of file Catalog.h.

References RDCatalog::Catalog< entryType, paramType >::d_fpLength.

Referenced by RDCatalog::HierarchCatalog< entryType, paramType, orderType >::addEntry(), and RDCatalog::HierarchCatalog< entryType, paramType, orderType >::initFromStream().

Member Data Documentation

d_fpLength

template<class entryType , class paramType >

unsigned int RDCatalog::Catalog< entryType, paramType >::d_fpLength {0}

protected

the length of our fingerprint

Definition at line 109 of file Catalog.h.

Referenced by RDCatalog::Catalog< entryType, paramType >::getFPLength(), and RDCatalog::Catalog< entryType, paramType >::setFPLength().

dp_cParams

template<class entryType , class paramType >

paramType* RDCatalog::Catalog< entryType, paramType >::dp_cParams

protected

our params object

Definition at line 110 of file Catalog.h.

Referenced by RDCatalog::Catalog< entryType, paramType >::getCatalogParams(), RDCatalog::Catalog< entryType, paramType >::setCatalogParams(), and RDCatalog::Catalog< entryType, paramType >::~Catalog().

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The documentation for this class was generated from the following file:

• Catalog.h